Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0180.Seq
         (269 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   0.44 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   1.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   2.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   5.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   5.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   5.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   7.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    19   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 0.44
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 169 DYCPTSRCDDQSSC 210
           D+C T+ C++Q++C
Sbjct: 101 DWCSTNPCENQATC 114


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 226 RSQASDSLTGHRIGSLDSNQKDSPR 152
           R    +S TG+ +GS  +N   SP+
Sbjct: 77  RPMHQNSYTGYHLGSYAANCPPSPK 101


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 167 LITVQRADAMTSQAVRSLRAPTVQRQPAN 253
           L TV+    +  +AV SLRA   Q  PA+
Sbjct: 98  LATVEET-VVRDKAVESLRAVAQQHSPAD 125


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 136 ILDKCPVDCPSDYCPTS 186
           IL K       DYCPTS
Sbjct: 658 ILKKLLPKVYEDYCPTS 674


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 25  LVEMGRFCXIVLTAAWLV 78
           +V+MG F    L   WL+
Sbjct: 210 IVDMGEFLLYRLLRCWLI 227


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 25  LVEMGRFCXIVLTAAWLV 78
           +V+MG F    L   WL+
Sbjct: 210 IVDMGEFLLYRLLRCWLI 227


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 192 ASARWTVIRRTVHGALV 142
           A ARW    +T HG L+
Sbjct: 183 AVARWMQDPKTNHGILI 199


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 178 PTSRCDDQSSCPKP 219
           PT  CD  S+ P P
Sbjct: 203 PTEDCDVPSTIPPP 216


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 136 ILDKCPVDCPSDYCPTSRCDDQSSCPKP 219
           ++   P D  + Y P S  D +   P P
Sbjct: 12  LISNTPKDMNARYLPPSLSDTRPMLPYP 39


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 251 LQAGAEQSALAGFG 210
           LQAGA+ S +  FG
Sbjct: 115 LQAGADISMIGQFG 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,872
Number of Sequences: 336
Number of extensions: 827
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)