Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0180.Seq
         (269 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    27   0.16 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   0.86 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   3.5  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    22   4.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    22   4.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    21   6.1  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       21   6.1  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 141 RQVPRGLSF*LLSNEPMR*PVKLSEACERRLFSASLQMRFNY 266
           R  PRG+S  +L++EP R  V+  E+ E  L++      + Y
Sbjct: 163 RNEPRGVSKFILASEPHRYVVQRYESSEEELYARRQNCYYYY 204


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 106 VTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAPAC 249
           + E    D E+L  CP + PSD     R D+   C    +  C    C
Sbjct: 481 INESLTVDIEMLCSCPCEHPSDPEYRERADE---CSNAGTYKCGICEC 525


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 253  ICRLALNSRRSQASDSLTGHRIGSLDSNQ 167
            +CR   N R S A  S+ GH   S  S Q
Sbjct: 1302 VCRGETNRRWSMALSSMGGHSQTSAQSLQ 1330


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +1

Query: 127 DSEILDKC---PVDCPSDYCPTSRCDDQ 201
           +S +LD+     +D PS+Y  + R D+Q
Sbjct: 167 ESNLLDRGNRRAIDIPSNYTASDRVDEQ 194


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 239 AEQSALAGFGQLDWSSH 189
           A QSAL  F   DW S+
Sbjct: 104 ASQSALQKFASTDWMSN 120


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 127  DSEILDKCPVDCPSDYC 177
            + E+++  P DC  D C
Sbjct: 1256 EDEVIEDSPADCCPDNC 1272


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 109 TEPPCADSEILDKCPVDCPSDYCPTSRCDD 198
           T P   + E  D  P D  SD+   S  DD
Sbjct: 83  TNPQIVEYEFDDDLPFDDDSDFDDDSDFDD 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,636
Number of Sequences: 2352
Number of extensions: 3935
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)