Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0180.Seq
(269 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003148-7|AAB54208.1| 96|Caenorhabditis elegans Hypothetical ... 32 0.064
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 29 0.34
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 0.79
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 28 0.79
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 0.79
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 1.0
AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical ... 28 1.0
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 27 1.8
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 2.4
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 2.4
Z81044-10|CAB02807.3| 368|Caenorhabditis elegans Hypothetical p... 26 3.2
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 26 3.2
U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 26 4.2
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 25 7.3
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 25 7.3
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 25 7.3
U13643-2|AAN65298.1| 354|Caenorhabditis elegans Hypothetical pr... 25 7.3
U13643-1|AAA21083.1| 427|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 25 9.7
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 25 9.7
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 25 9.7
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 25 9.7
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 25 9.7
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 25 9.7
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 25 9.7
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 25 9.7
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 25 9.7
AF099914-3|AAC68758.2| 265|Caenorhabditis elegans Hypothetical ... 25 9.7
AF003740-5|AAL08031.1| 195|Caenorhabditis elegans Hypothetical ... 25 9.7
AC006679-8|AAK84470.1| 630|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF003148-7|AAB54208.1| 96|Caenorhabditis elegans Hypothetical
protein F32B5.4 protein.
Length = 96
Score = 31.9 bits (69), Expect = 0.064
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 52 IVLTAAWLVVAKADATDDVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASAD 231
+VL+ + VA+ A + +T+P A+++ D P+D P S D + P+ + A+
Sbjct: 10 VVLSLLAMFVAQEVAEEALTDPEAAEADNAKNNATDAPADATPGSG-SDAPAAPEGSGAE 68
Query: 232 CSAPACK 252
A K
Sbjct: 69 AEATTAK 75
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 29.5 bits (63), Expect = 0.34
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 145 KCPVDCPSDYCPTSRCDDQSSCPKPASADCSAPACK 252
+C C C TS C+ +S P PAS C P C+
Sbjct: 91 QCQPTCQQS-CQTSSCNPMTSTPIPASQSC-LPECE 124
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +1
Query: 127 DSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADC 234
D + CP C CP D S CP +C
Sbjct: 1543 DCNLPKSCPTQCIGSRCPYGIRTDGSGCPANGVCEC 1578
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 133 EILDKCPVDCPSDYCPTSRCDDQSSC 210
+IL +C C D C T+ C SC
Sbjct: 46 DILQQCICTCAMDPCQTTICGPSESC 71
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 85 KADATDDVTEPPCADSEILDKCPVDCPS--DYCPTSRCDDQSSCPKPASADCSAPAC 249
KA D PC + + D C + D+C +C ++ S + SAD + C
Sbjct: 54 KALVFDKTIVIPCCGARMCDVCGPKWTNGRDFCELGKCVNKESAKRRKSADATRQPC 110
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 85 KADATDDVTEPPCADSEILDKCPVDCPS--DYCPTSRCDDQSSCPKPASADCSAPAC 249
KA D PC + + D C + D+C +C ++ S + SAD + C
Sbjct: 124 KALVFDKTIVIPCCGARMCDVCGPKWTNGRDFCELGKCVNKESAKRRKSADATRQPC 180
Score = 25.4 bits (53), Expect = 5.6
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +1
Query: 175 CPTSRCDDQSSCPKPASADCSAPACK 252
CP + C + P+P ++ C C+
Sbjct: 42 CPVAHCYSSLTAPEPMTSTCEGENCQ 67
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 176 VQRADAMTSQAVRSLRAPTVQRQPAN 253
+Q+AD+ TS + R+ AP+++R+P +
Sbjct: 260 MQKADSSTSSSSRTTTAPSLERKPVS 285
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 176 VQRADAMTSQAVRSLRAPTVQRQPAN 253
+Q+AD+ TS + R+ AP+++R+P +
Sbjct: 1025 MQKADSSTSSSSRTTTAPSLERKPVS 1050
>AL032640-2|CAA21643.2| 502|Caenorhabditis elegans Hypothetical
protein Y43F8A.2 protein.
Length = 502
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 157 DCPSDYCPTSRCDDQSSCPKPASADCSAPA 246
D PS PT+ D S+ P P A +APA
Sbjct: 23 DTPSTADPTAGSTDTSATPMPTDAPTAAPA 52
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 106 VTEPPCADSEILDKCPVDCPSD--YCPTSRCDDQSSCPKP 219
V + PC D E + K P PSD +C R +S P P
Sbjct: 105 VEKYPCDDDETITKAPTTEPSDDLWCWQLRSRSFASSPPP 144
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 91 DATDDVTE-PPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAP 243
D T D E PP +E+ D PS + + ++ +PASA+ AP
Sbjct: 1769 DETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSETAADAEPASAEDQAP 1820
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +1
Query: 85 KADATDDV---TEPPCADSEILDKCPVDCPSD 171
K DAT+ V T P D+E PVD P D
Sbjct: 1441 KEDATETVNGATSEPATDAESEQNAPVDEPMD 1472
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 91 DATDDVTE-PPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAP 243
D T D E PP +E+ D PS + + ++ +PASA+ AP
Sbjct: 1769 DETQDSAEAPPVLSAEVNSDDSNDVPSTSAAAAVSSETAADAEPASAEDQAP 1820
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +1
Query: 85 KADATDDV---TEPPCADSEILDKCPVDCPSD 171
K DAT+ V T P D+E PVD P D
Sbjct: 1441 KEDATETVNGATSEPATDAESEQNAPVDEPMD 1472
>Z81044-10|CAB02807.3| 368|Caenorhabditis elegans Hypothetical
protein C30H6.3 protein.
Length = 368
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 7 NTTDKHLVEMGRFCXIVLTAAWLVVAKADATDDVTEPPCADSEI-LDKCPVDCPSDY 174
+TT K + I+ T L V K T +E ++ KCPV CP+++
Sbjct: 195 STTSKTTTTVPISTFIITTPTTLPVTKTIKTTTASEAITFTTQFDASKCPVTCPTNW 251
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 TAAWLVVAKADATDDVTEPPCADSEILDK---CPVDCPSDYCPTSRCDDQSSC 210
T + + D TD T+ P + E+ + CPV P C ++C + C
Sbjct: 239 TEEYTTTTEEDVTDLETQAPNVE-EVTEPHFVCPVGAPIGECIANKCPEGHGC 290
>U28928-2|AAA68335.2| 329|Caenorhabditis elegans Hypothetical
protein C44B7.4 protein.
Length = 329
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 269 SVVESHLQAGAEQSALAGFGQLDWS 195
+V + H AE +A A FGQ DW+
Sbjct: 239 AVAKEHASQLAEHNARAFFGQKDWT 263
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 163 PSDYCPTSRCDDQSSCPKPASADCSAPA 246
P+ Y P S DD+ C +P A AP+
Sbjct: 1107 PTHYSPISSDDDEIQCIEPPPAKKPAPS 1134
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +1
Query: 79 VAKADATDDVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAPAC 249
V A T P C + ++C C S S SSC S+ C+ P C
Sbjct: 55 VCMAQCQSSCTTPIC-QQQCSNQCNQQCTS--ITISSGPSCSSCQSACSSACTTPTC 108
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +1
Query: 82 AKADATDDVTEPPCADSEILDKCPVD--CPSDY---CPTSRCDDQSSCPKPA 222
A TD+++ PC + CP C S+ CP R D+S PA
Sbjct: 1109 ASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPA 1160
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +1
Query: 82 AKADATDDVTEPPCADSEILDKCPVD--CPSDY---CPTSRCDDQSSCPKPA 222
A TD+++ PC + CP C S+ CP R D+S PA
Sbjct: 451 ASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPA 502
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +1
Query: 82 AKADATDDVTEPPCADSEILDKCPVD--CPSDY---CPTSRCDDQSSCPKPA 222
A TD+++ PC + CP C S+ CP R D+S PA
Sbjct: 451 ASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPA 502
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 160 CPSDYCPTSRCDDQSSC 210
CP CP + CDD C
Sbjct: 708 CPFAPCPKNTCDDVEGC 724
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 160 CPSDYCPTSRCDDQSSC 210
CP CP + CDD C
Sbjct: 549 CPFAPCPKNTCDDVEGC 565
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 160 CPSDYCPTSRCDDQSSC 210
CP CP + CDD C
Sbjct: 589 CPFAPCPKNTCDDVEGC 605
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/67 (25%), Positives = 26/67 (38%)
Frame = +1
Query: 46 CXIVLTAAWLVVAKADATDDVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPAS 225
C TAA + +A+ V++ + + C C +C S+C K S
Sbjct: 150 CQAPATAAPQISLNLEAS--VSQSAQCEPQCQQSCQQQCVQQQQSMQQC--ASACTKSCS 205
Query: 226 ADCSAPA 246
CS PA
Sbjct: 206 QSCSQPA 212
>U13643-2|AAN65298.1| 354|Caenorhabditis elegans Hypothetical
protein T07E3.4b protein.
Length = 354
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 173 TVQRADAMTSQAVRSLRAPTVQR 241
T RAD++T + + L APTV+R
Sbjct: 178 TGMRADSVTDEHLAQLDAPTVRR 200
>U13643-1|AAA21083.1| 427|Caenorhabditis elegans Hypothetical
protein T07E3.4a protein.
Length = 427
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 173 TVQRADAMTSQAVRSLRAPTVQR 241
T RAD++T + + L APTV+R
Sbjct: 251 TGMRADSVTDEHLAQLDAPTVRR 273
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 149 APWTVLLITVQRADAMTSQAVRSLRAPTVQRQPAN 253
AP+ V I Q+ D M SQ + + APT QP N
Sbjct: 265 APFPVQYIP-QQHDLMNSQPMYAPMAPTYYYQPIN 298
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 142 DKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAPAC 249
D C V CP D P Q CPK + C C
Sbjct: 75 DTCTV-CPMDMSPCETDQYQKICPKTCNV-CPPAIC 108
>Z81076-3|CAB03052.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.3 protein.
Length = 394
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +1
Query: 103 DVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPAS 225
D TE P S + + P D PT D + PAS
Sbjct: 289 DTTEAPTGGSTVGESEPCDTTEASEPTGHTDQAETVTDPAS 329
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 148 CPVDCPSDYCPTSRCDDQSS 207
C +CPSD+ P CD + S
Sbjct: 814 CDTNCPSDFSPV--CDSKGS 831
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 121 CADSEILDKCPVDCPSDYCPTS--RCDDQSSCPKPASADC 234
CA+ + C + S+YCP + C+ S K S DC
Sbjct: 330 CAEVKAQGACKLSVASEYCPRTCEYCNPPSDMAKTMS-DC 368
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 149 APWTVLLITVQRADAMTSQAVRSLRAPTVQRQPAN 253
AP+ V I Q+ D M SQ + + APT QP N
Sbjct: 265 APFPVQYIP-QQHDLMNSQPMYAPMAPTYYYQPIN 298
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 88 ADATDDVTEPPCADSEILDKCPVDCPS-DYCPTSRCD--DQSSCPK 216
AD D++ PP ++ CP S D CD + ++CP+
Sbjct: 101 ADVPQDLSNPPGIPEQVKPICPYGASSYDLPSVLLCDPTEDNACPE 146
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 64 AAWLVVAKADATDDVTEPPCADSEILDKCPVDCPSDYCPTSRCDDQSSCPKPASADCSAP 243
AA L A A A + P A++ P P + + D++ P PA+ + AP
Sbjct: 519 AATLETAPAPAAEPA---PAAEAAAGYDAPSSVPEETPAPAPAADETPAPAPAAEETPAP 575
Query: 244 A 246
A
Sbjct: 576 A 576
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 CADSEILDKCPVDCPSDYCPTS-RCDDQSSC 210
C +S KC +CP D C CD C
Sbjct: 852 CPESTFGLKCSKECPKDGCGDGYECDAAIGC 882
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 CADSEILDKCPVDCPSDYCPTS-RCDDQSSC 210
C +S KC +CP D C CD C
Sbjct: 852 CPESTFGLKCSKECPKDGCGDGYECDAAIGC 882
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 CADSEILDKCPVDCPSDYCPTS-RCDDQSSC 210
C +S KC +CP D C CD C
Sbjct: 852 CPESTFGLKCSKECPKDGCGDGYECDAAIGC 882
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 CADSEILDKCPVDCPSDYCPTS-RCDDQSSC 210
C +S KC +CP D C CD C
Sbjct: 852 CPESTFGLKCSKECPKDGCGDGYECDAAIGC 882
>AF099914-3|AAC68758.2| 265|Caenorhabditis elegans Hypothetical
protein C40A11.4 protein.
Length = 265
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 154 VDCPSDYCPTSRCDDQ 201
V C S +CP +CDD+
Sbjct: 204 VPCDSCWCPGRKCDDK 219
>AF003740-5|AAL08031.1| 195|Caenorhabditis elegans Hypothetical
protein C41D11.9 protein.
Length = 195
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 VAKADATDDVTEPPCADSEILD-KCPVDCPSDYCPTSRCDDQSSCPKPASADCSAPACK 252
+ T DV C S L P DC C + CP P S + C+
Sbjct: 18 IGSISGTKDVKSKNCDGSAGLTCTFPGDCRIGDTVKVNCTSRKGCPNPVSRNNVEAVCR 76
>AC006679-8|AAK84470.1| 630|Caenorhabditis elegans Hypothetical
protein R13A5.9 protein.
Length = 630
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 7 NTTDKHLVEMGRFCXIVLTAAWLVVAKADATDDVTEPPCADSEILD 144
NTT+K+ C I + AA + +K DDV P ++D
Sbjct: 297 NTTEKNYTLCFVMCVIFMLAAMGLASKFKFDDDVPAPGEVHGLVMD 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,614,893
Number of Sequences: 27780
Number of extensions: 96028
Number of successful extensions: 398
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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