Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0177.Seq
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   5.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 122 LPAREGGDHRQRPGQQDH 175
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 448 TARSXSWQNCAXCSYH 495
           T RS   Q C  C YH
Sbjct: 27  TKRSTISQGCKACGYH 42


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 415 VSSMVLTKMKETARSXSWQNC 477
           + +  +  M+  ARS  W+NC
Sbjct: 146 IKNQGMPTMEAIARSGIWENC 166


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 121 TPTQEYVVPRSIPT 80
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 312 CTVASSNLRPMRRLASNIVCWGSSPP 235
           CT  + N R  R     I C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 375 TLILGLPPSLTTSKGQC 325
           +L+LGL PS   + G+C
Sbjct: 17  SLLLGLYPSYLQTVGKC 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,972
Number of Sequences: 336
Number of extensions: 2867
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)