Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0177.Seq
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 126 9e-30
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 126 9e-30
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 110 5e-25
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 110 7e-25
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 99 2e-21
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 98 4e-21
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 98 4e-21
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 63 1e-10
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 63 1e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 63 1e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 47 7e-06
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 32 0.28
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 30 0.86
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 27 6.1
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 27 6.1
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.0
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.0
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 27 8.0
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 126 bits (304), Expect = 9e-30
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPN 254
MNP+
Sbjct: 61 MNPH 64
Score = 108 bits (260), Expect = 2e-24
Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPRKSVP 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F P +
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 WCLRK*RKLPEAYLGKTVXNAVITGSAY 508
L K ++ EA+LG TV +AV+T AY
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAY 150
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 126 bits (304), Expect = 9e-30
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPN 254
MNP+
Sbjct: 61 MNPH 64
Score = 105 bits (252), Expect = 2e-23
Identities = 49/88 (55%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPRKSVP 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F P +
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 WCLRK*RKLPEAYLGKTVXNAVITGSAY 508
L K +K EA+L TV +AV+T Y
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTY 150
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 110 bits (265), Expect = 5e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F P +
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L+K ++ E YLG TV +AVIT AY
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAY 149
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 110 bits (265), Expect = 5e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F P +
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L+K ++ E YLG TV +AVIT AY
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAY 149
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 110 bits (264), Expect = 7e-25
Identities = 49/68 (72%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQY 263
NP NT +
Sbjct: 61 RNPENTVF 68
Score = 91.9 bits (218), Expect = 2e-19
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++T+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F +
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L+K ++ EA LG +V +AVIT AY
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAY 149
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
Score = 92.3 bits (219), Expect = 2e-19
Identities = 42/87 (48%), Positives = 57/87 (65%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++TIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F P +
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L K +++ E+YLG V NAV+T AY
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVVTVPAY 177
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 97.9 bits (233), Expect = 4e-21
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++TIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F P +
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L K +++ E+YLGK V NAV+T AY
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 97.9 bits (233), Expect = 4e-21
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPRKSVPW 427
P++TIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F P +
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
L K +++ E+YLGK V NAV+T AY
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPAY 180
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 N-PNTQYS 266
N NT ++
Sbjct: 90 NSANTLFA 97
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPRKSVPWC 430
+T+F KRLIGR++ED VQ D+K P+++V + G + + + K + P + +
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKEYPPSQVGAFV 148
Query: 431 LRK*RKLPEAYLGKTVXNAVITGSAY 508
L K ++ E+YLG TV N V+T AY
Sbjct: 149 LMKMKETAESYLGTTVNNPVVTVPAY 174
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 N-PNTQYS 266
N NT ++
Sbjct: 90 NSANTLFA 97
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPRKSVPWC 430
+T+F KRLIGR++ED VQ D+K P+++V + G + + + K + P + +
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVGAFV 148
Query: 431 LRK*RKLPEAYLGKTVXNAVITGSAY 508
L K ++ E+YLG TV NAV+T AY
Sbjct: 149 LMKMKETAESYLGTTVNNAVVTVPAY 174
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNV 278
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 54.4 bits (125), Expect = 5e-08
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPRKSV-PW 427
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E F +V
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNEKPLKFSAVTVSSL 119
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
LR + E LG V +AVIT AY
Sbjct: 120 ILRCLKYNAERKLGLEVKSAVITVPAY 146
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNV 278
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 54.4 bits (125), Expect = 5e-08
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPRKSV-PW 427
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E F +V
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNEKPLKFSAVTVSSL 119
Query: 428 CLRK*RKLPEAYLGKTVXNAVITGSAY 508
LR + E LG V +AVIT AY
Sbjct: 120 ILRCLKYNAERKLGLEVKSAVITVPAY 146
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 47.2 bits (107), Expect = 7e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 54 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 218
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 219 DAAKNQVAMNP 251
A Q NP
Sbjct: 85 TRATEQQEHNP 95
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPRKS 418
P+ TI+DAKR IGR FE + +D K +PF++ D GK ++ K +P +
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 419 VPWCLRK*RKLPEAYLGKTVXNAVIT 496
+ + +LG T+ VI+
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVIS 180
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 248
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPRKSVPW 427
++T+ + K LIGRKF D Q + P +VV ++V+Y GE TF P + +
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAA 120
Query: 428 CLRK*RKLPEAYLG--KTVXNAVITGSAY 508
L K R + E+ L K V + V+ +Y
Sbjct: 121 LLTKLRTIVESQLSDVKKVSDCVLAVPSY 149
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 255 TQYSMPN 275
+ N
Sbjct: 86 LVHGQLN 92
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D +++IG+ + + NT+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 30.3 bits (65), Expect = 0.86
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D + +IG+ + + NT+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 135 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCK 314
K+ I+ N +G T YV D + IG+ + + NT+Y++ + S+++L +
Sbjct: 5 KLTILDNGEGLFQTHVYVK--DVQEAIGEQMNTESRLGENTKYTVVGDGNGFMSRVVLVE 62
Query: 315 P 317
P
Sbjct: 63 P 63
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 170 DHSVLCCVHRHRASHRRCRQEPGGDEPQH 256
D V+CCVH R S+ + Q+ D+ Q+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQY 51
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 224 RQEPGGDEPQHTIFDAKRLIGRKFEDATVQAD 319
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 194 HRHRASHRR--CRQEPGGDEPQHTIFDAKRLIGR-KFEDATVQADM 322
H+HR SHR Q+ GDE + + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 456 SGSFLHFRKHHGTDFLGKKVLSSPL 382
SG+F+ F +H GTD + ++S+P+
Sbjct: 218 SGNFVFFIEHRGTDAEDEFIMSTPI 242
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 169 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 65
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 370 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 260
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 409 EEVSSMVLTKMKETARSXSWQNCAXC-SYHXFRVL 510
E++ SM+L K+ + + +WQN + SY+ RVL
Sbjct: 701 EQLISMILEKLTRSNSTVTWQNLSDSPSYNLSRVL 735
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 409 EEVSSMVLTKMKETARSXSWQNCAXC-SYHXFRVL 510
E++ SM+L K+ + + +WQN + SY+ RVL
Sbjct: 701 EQLISMILEKLTRSNSTVTWQNLSDSPSYNLSRVL 735
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,649,281
Number of Sequences: 27780
Number of extensions: 283697
Number of successful extensions: 900
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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