Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0176.Seq
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   3.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   3.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   4.9  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   6.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.6  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 80  HRHRVTRPVLVPHRIHHLHH 139
           H H+      +PH  HH HH
Sbjct: 93  HHHQHPHHHQLPHHPHHQHH 112


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 80  HRHRVTRPVLVPHRIHHLHH 139
           H H+      +PH  HH HH
Sbjct: 93  HHHQHPHHHQLPHHPHHQHH 112


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 267 RTHNSQFNHPYGYQASSANR--GRHRRPAPAA 356
           +TH+ Q  HP  +Q  S      +H++P+ +A
Sbjct: 251 QTHHQQQQHPSSHQQQSQQHPSSQHQQPSRSA 282


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 356 RGGGWAAMSSAVCTGGLISVRMVELRIVS 270
           R G W   ++  C+GG+ S   ++L I S
Sbjct: 163 RLGEWDLSTANDCSGGICSAGPIDLEIES 191


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 116 HRIHHLHH 139
           H +HHLHH
Sbjct: 817 HHLHHLHH 824


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.130    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,589
Number of Sequences: 2352
Number of extensions: 7342
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)