Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0175.Seq
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95636-1|CAB09137.1|  953|Homo sapiens laminin alpha 5 chain pro...    30   6.0  
BC003355-1|AAH03355.1|  670|Homo sapiens LAMA5 protein protein.        30   6.0  
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.     30   6.0  
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr...    30   6.0  
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.     30   6.0  

>Z95636-1|CAB09137.1|  953|Homo sapiens laminin alpha 5 chain
           protein.
          Length = 953

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430 LVDHTITFTGS*IIKILLSNLF*IIGNISLGFAFITTTTRILL 302
           LV   +TF G   +++ LSN+  + GN+  GF F +     LL
Sbjct: 378 LVGRAMTFHGHGFLRLALSNVAPLTGNVYSGFGFHSAQDSALL 420


>BC003355-1|AAH03355.1|  670|Homo sapiens LAMA5 protein protein.
          Length = 670

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430 LVDHTITFTGS*IIKILLSNLF*IIGNISLGFAFITTTTRILL 302
           LV   +TF G   +++ LSN+  + GN+  GF F +     LL
Sbjct: 285 LVGRAMTFHGHGFLRLALSNVAPLTGNVYSGFGFHSAQDSALL 327


>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
          Length = 3690

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430  LVDHTITFTGS*IIKILLSNLF*IIGNISLGFAFITTTTRILL 302
            LV   +TF G   +++ LSN+  + GN+  GF F +     LL
Sbjct: 3120 LVGRAMTFHGHGFLRLALSNVAPLTGNVYSGFGFHSAQDSALL 3162


>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
            precursor protein.
          Length = 3695

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430  LVDHTITFTGS*IIKILLSNLF*IIGNISLGFAFITTTTRILL 302
            LV   +TF G   +++ LSN+  + GN+  GF F +     LL
Sbjct: 3120 LVGRAMTFHGHGFLRLALSNVAPLTGNVYSGFGFHSAQDSALL 3162


>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
          Length = 1645

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 430  LVDHTITFTGS*IIKILLSNLF*IIGNISLGFAFITTTTRILL 302
            LV   +TF G   +++ LSN+  + GN+  GF F +     LL
Sbjct: 1070 LVGRAMTFHGHGFLRLALSNVAPLTGNVYSGFGFHSAQDSALL 1112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,145,647
Number of Sequences: 237096
Number of extensions: 1467476
Number of successful extensions: 6234
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6234
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)