Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0174.Seq
(479 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 22 2.6
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 3.4
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 3.4
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 4.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 4.5
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 5.9
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 5.9
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 5.9
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 5.9
AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone recepto... 21 7.8
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 7.8
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 22.2 bits (45), Expect = 2.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITFIVGA 201
N ++ KP + +R A NN L T I+ A
Sbjct: 34 NRRSNKPIMEKRRRARINNSLNELKTLILDA 64
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 308 NFLFTFCQTSIKHSIED*LAVANTYLCAGIIFVCPGAPTIKVISDI 171
N +++ CQ + +E + AN + I VC G KV+ D+
Sbjct: 146 NTVWSHCQCVLADGVERGILTANRMIPGPSIQVCEGD---KVVIDV 188
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 308 NFLFTFCQTSIKHSIED*LAVANTYLCAGIIFVCPGAPTIKVISDI 171
N +++ CQ + +E + AN + I VC G KV+ D+
Sbjct: 146 NTVWSHCQCVLADGVERGILTANRMIPGPSIQVCEGD---KVVIDV 188
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.4 bits (43), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 370 SSQ*IYFSKARNADGSTSGTSISCLHS 290
S++ YF +ARN G+ S T+ SC S
Sbjct: 368 SNRKFYFKRARN--GTFSTTANSCRSS 392
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = -1
Query: 317 WNLNFLFTFCQTSIKHSIED*LAVANTYLCAGIIFVCP 204
+NL ++ F SI ++ + + Y ++F CP
Sbjct: 51 YNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCP 88
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 363 CDEIQLEADTVLSTLYVAKK 422
CDEI E T+L Y +K
Sbjct: 279 CDEICNEGQTILGISYSLEK 298
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 363 CDEIQLEADTVLSTLYVAKK 422
CDEI E T+L Y +K
Sbjct: 279 CDEICNEGQTILGISYSLEK 298
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 363 CDEIQLEADTVLSTLYVAKKYI 428
CD +E TVL L V Y+
Sbjct: 356 CDYFTIETKTVLDVLGVTVTYL 377
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.0 bits (42), Expect = 5.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 363 CDEIQLEADTVLSTLYVAKKYI 428
CD +E TVL L V Y+
Sbjct: 282 CDYFTIETKTVLDVLGVTVTYL 303
>AM295016-1|CAL25731.1| 96|Tribolium castaneum ecdysone receptor
(isoform B) protein.
Length = 96
Score = 20.6 bits (41), Expect = 7.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 196 GAPGHTKIIPAHKYVLATASQSS 264
G PGHT I H + S +S
Sbjct: 66 GLPGHTIIASNHHLAKSDTSSAS 88
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 20.6 bits (41), Expect = 7.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 259 SSMLCFMEVWQNVNKKLRF 315
SS++ E W ++NK +F
Sbjct: 37 SSLIFNQEQWSSLNKNFQF 55
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,984
Number of Sequences: 336
Number of extensions: 2586
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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