Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0174.Seq
(479 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 74 5e-14
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 74 7e-14
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 73 9e-14
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 71 7e-13
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 68 4e-12
SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28) 66 2e-11
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 57 7e-09
SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 45 3e-05
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 45 3e-05
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 45 4e-05
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 42 3e-04
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 40 0.001
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16) 39 0.002
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.004
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 38 0.006
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 36 0.023
SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23) 35 0.030
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.37
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.37
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 31 0.49
SB_30686| Best HMM Match : BTB (HMM E-Value=0.52) 30 0.86
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84) 27 6.1
SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 27 8.0
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 97.1 bits (231), Expect = 7e-21
Identities = 45/99 (45%), Positives = 69/99 (69%)
Frame = +3
Query: 180 YYFYCRSPRTHKDYTSTQICVSNCKSVFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYI 359
Y+ + P+ + + + +S +VF AMF GG+A E+E+PDVEPSAF+ALL+++
Sbjct: 1612 YFLVGKGPQRRR-IPAHKFVLSIGSAVFDAMFNGGIATQSDEVELPDVEPSAFMALLRFL 1670
Query: 360 YCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
Y DE+Q+ +TV++TLY AKKY P L KACV++L+ +L
Sbjct: 1671 YTDEVQIGPETVMTTLYTAKKYAIPTLEKACVDFLKKNL 1709
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
NWQA K V +R + ++NN+++SD+ F+VG + IPAHK+VL+ S
Sbjct: 1587 NWQAEKTKVGDRISFLYNNEILSDVYFLVGKGPQRRRIPAHKFVLSIGS 1635
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 74.1 bits (174), Expect = 5e-14
Identities = 27/74 (36%), Positives = 49/74 (66%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VF+AMFYG ++ ++E+PD + + L+Y+YC+ ++ ++ + LY++KKY+ P
Sbjct: 60 VFFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRVKFTMESAIQALYLSKKYLVPS 119
Query: 438 LAKACVNYLETSLT 479
LAK CV Y+ ++T
Sbjct: 120 LAKHCVTYIRDNVT 133
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI--IPAHKYVLATAS 255
+WQ TK ++ R A FN+ LMSD+ F+V P + IPAHKY+L +S
Sbjct: 8 DWQLTKTSLNSRVAHTFNSPLMSDVAFVVEDPAKQDVVSIPAHKYILGVSS 58
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 73.7 bits (173), Expect = 7e-14
Identities = 33/95 (34%), Positives = 52/95 (54%)
Frame = +3
Query: 183 YFYCRSPRTHKDYTSTQICVSNCKSVFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIY 362
+ ++ T + + + +S VF AMF+G LAE + +PD F LL+Y+Y
Sbjct: 31 FLITKADGTEVRFPAHKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLY 90
Query: 363 CDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLE 467
CD++ VL LY++KKYI HL + C +Y+E
Sbjct: 91 CDQVVFTGKNVLDVLYLSKKYIISHLIEKCWDYIE 125
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 255
+WQ K +++ER M++N L SDI F++ T++ PAHK+VL+ +S
Sbjct: 5 SWQTEKTSIKERVHYMYSNSLFSDIEFLITKADGTEVRFPAHKFVLSVSS 54
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 73.3 bits (172), Expect = 9e-14
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VFYAMFYG +AE K EI V D + +F+ LL+Y Y DE + + VL LY+AKKYI P
Sbjct: 2789 VFYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATINEENVLGVLYLAKKYILPF 2848
Query: 438 LA 443
LA
Sbjct: 2849 LA 2850
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
NWQ + +RER+ +FNN+L+SD++F VG IP HK +LA +S
Sbjct: 2739 NWQTKRRCIRERSEFLFNNKLLSDVSFRVGKEQGKYFIPGHKLILAISS 2787
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 70.5 bits (165), Expect = 7e-13
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VF AMF+G +AE +++ +PD A +L+Y Y DE++L V+S +Y+A+KYI P
Sbjct: 474 VFEAMFHGAMAESSRKVSLPDCTAEALSEMLRYAYFDEVELTGSNVMSVMYLAEKYILPG 533
Query: 438 LAKACVNYLETSL 476
L + C +L+ +L
Sbjct: 534 LNEKCTQFLQENL 546
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 255
WQ T++ER M+ N ++SD+ F+V KI IPAH+YVLA +S
Sbjct: 424 WQPAFKTIKERGKHMWKNPVLSDVEFLVCTSAGVKISIPAHRYVLAVSS 472
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = +3
Query: 183 YFYCRSPRTHKDYTSTQICVSNCKSVFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIY 362
+ C S + + +S VF AMF+G +AE +EI +PD A +L+Y Y
Sbjct: 31 FVVCTSAGEKISIPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSEMLRYAY 90
Query: 363 CDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
DE++L ++ +Y+A+KY P L + C +YL+ +L
Sbjct: 91 YDEVKLTGSNAMAVMYLAEKYNFPGLKEKCSHYLQENL 128
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 255
WQ T++ER M+ N ++SD+ F+V KI IPAH+YVL+ +S
Sbjct: 6 WQPAFKTIKERGKHMWKNPVLSDVEFVVCTSAGEKISIPAHRYVLSVSS 54
>SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28)
Length = 436
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VF+AMF+G +A+ +EI V D E F LL+Y+Y D+ L D L LY+ KKY+
Sbjct: 60 VFFAMFFGRMADDTKEIPVVDTEEECFTELLRYVYTDKCLLTLDNALGVLYLGKKYLLSV 119
Query: 438 LAKACVNYLETSL 476
L C ++E L
Sbjct: 120 LVNKCAAFVEKHL 132
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +1
Query: 112 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
WQ TVRERN MFNN+L+SD+ F+VG+ IPAH+YVLA +S
Sbjct: 13 WQLKVTTVRERNEFMFNNELLSDVHFLVGS--KKARIPAHRYVLAISS 58
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VF AMF+G LAE I +PD L +L++IY +EI+ + + LY+AKKYI P
Sbjct: 54 VFEAMFFGKLAETGFTIALPDCSAEGMLEMLRFIYTEEIRFTINIAVEVLYLAKKYILPC 113
Query: 438 LAKACVNYLETSL 476
L + C Y +
Sbjct: 114 LEERCHEYFNEEM 126
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 WQATKPTVRERNAAMFNNQLMSDITF-IVGAPGHTKIIPAHKYVLATAS 255
WQ T++ER A M+NN+ SD+ F ++ A G IPAHKYVLAT+S
Sbjct: 4 WQTNLKTLKERGAHMYNNRTFSDVEFSVMNADGEKVSIPAHKYVLATSS 52
>SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +3
Query: 306 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
IE+ + EP+AFL LL+Y+Y DE+QL + +A+KY+ PHLA C ++L T+LT
Sbjct: 117 IEISECEPAAFLELLRYLYYDEVQL-TTLQHGGMDLARKYLIPHLADICTDFLVTNLT 173
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 103 DPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
D WQ + ++RERN MFNN+L SD+ F+VG + IPAHKY+++ +S
Sbjct: 31 DDQWQTSMCSLRERNKHMFNNELFSDVRFLVGRSA-KQSIPAHKYIMSISS 80
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 57.2 bits (132), Expect = 7e-09
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
VF AMF+G LAE + I +PD L +L+Y+Y DE+ + + LY+AKKYI P
Sbjct: 23 VFEAMFFGKLAETSRNITLPDCFYEGVLEMLRYLYRDEV-----IITNVLYLAKKYILPG 77
Query: 438 LAKACVNY 461
L + C Y
Sbjct: 78 LEELCYEY 85
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 193 VGAPGHTKIIPAHKYVLATAS 255
+ A G IPAHKYVLAT+S
Sbjct: 1 MNADGEKVSIPAHKYVLATSS 21
>SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 NWQATKPTVRERNAAMFNNQLMSDITF-IVGAPGHTKIIPAHKYVLATAS 255
+WQ ++ T+RER MFNN L SDI F +V + G IPAHK++LA S
Sbjct: 2 DWQTSRKTIRERTQYMFNNALHSDIEFAVVKSNGELDKIPAHKFILAIGS 51
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 258 VFYAMFYGGLAE--CKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIX 431
VF + F+G +AE C+ VE L L+Y+Y DE+QL + V+ L++AK YI
Sbjct: 53 VFESQFHGPMAEKDCRTINYNGTVE--GLLEFLRYVYYDEVQLNQNVVMEVLHLAKFYIV 110
Query: 432 PHLAKACVNYLETSL 476
P L C ++LE +L
Sbjct: 111 PSLVSMCSHFLEENL 125
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEAD 389
+ Y + +++C + FYAMF G LAE KQ+ I + D+ P L+++ Y +++ +
Sbjct: 21 QSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVE 80
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSL 476
V + L A + C +LE+ L
Sbjct: 81 NVQNLLATASLLQFHEVKDLCCQFLESQL 109
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 QICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTL 407
++ +++ F AMF G +AE Q + + D++P+A AL+ Y Y EI++ D V + L
Sbjct: 49 KLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPAAVQALISYSYTSEIEIRVDNVENLL 108
Query: 408 YVAKKYIXPHLAKACVNYLETSL 476
VA + AC ++ L
Sbjct: 109 SVACILQIDEVKNACSEFMRHQL 131
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 QICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTL 407
++ +++ S F AMF GGL E ++ + + DV+ A L+ + Y ++ + + V S +
Sbjct: 62 RLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVELLVDFAYTGKLDITTENVQSIM 121
Query: 408 YVAKKYIXPHLAKACVNYLETSL 476
Y + + + KAC +LE L
Sbjct: 122 YASSLFQLNAIQKACSEFLERQL 144
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 240 VSNCKSVFYAMFYGGLAECKQEI-EVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVA 416
+S F+AMF G + E Q++ + V P + ++L +IY EI L+ D V L A
Sbjct: 52 LSASSDYFFAMFNGNMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGA 111
Query: 417 KKYIXPHLAKACVNYLETSL 476
+ + AC +LE+ L
Sbjct: 112 NLMLVQSVKDACCRFLESRL 131
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 207 THKDYTSTQICVSNCKSVFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLE 383
T + + ++ ++ + F AMF G E K ++ + D++P A++ Y Y +I++
Sbjct: 40 TDQSFPGHKLVLAANSTYFRAMFGEGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEIN 99
Query: 384 ADTVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
AD + VA + + AC NYL L+
Sbjct: 100 ADNFGAVFAVANMWDVKFVLTACENYLRVHLS 131
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 43.2 bits (97), Expect = 1e-04
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 219 YTSTQICVSNCKSVFYAMFYGGLAECKQ--EIEVPDVEPSAFLALLKYIYCDEI---QLE 383
+T+ ++ ++ F A+ +GG+ E EIEV D AF ALL+YIY ++ +
Sbjct: 43 FTAHRVILAARSEYFRALLFGGMREANPGIEIEVADASSIAFDALLRYIYTGKMFLAEYR 102
Query: 384 ADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
+ V+ L +A KY L A YL+ L
Sbjct: 103 EEIVMELLGLAHKYGFLALESAIQGYLKAIL 133
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 207 THKDYTSTQICVSNCKSVFYAMF---YGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQ 377
T + + ++ ++ + F AMF G + K ++ + D++P A++ Y Y +I+
Sbjct: 82 TDQSFPGHKLVLAANSTYFRAMFGLREGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIE 141
Query: 378 LEADTVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
+ AD + VA + + AC NYL L+
Sbjct: 142 INADNFEAVFAVANMWDVKFVLTACENYLRVHLS 175
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
K++ + +I +++C FYAMF + E K IE+ + LL ++Y + ++L+
Sbjct: 47 KEFPAHRIVLASCSDYFYAMFTNDMLESQKGVIELQGLASDTMEVLLDFVYTETVKLDPT 106
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
L A + L A N++ T
Sbjct: 107 NCLGIRAFADTHCCDELKAAAENFIHKHFT 136
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
+++ +I ++ S AMF G+ E ++I++ ++P+ LL ++Y + + +
Sbjct: 39 REFRGHRIVLAGASSYLRAMFTNGMLESGMRDIKLQGIDPAVMEILLDFVYTGIVDISVE 98
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSL 476
V + L A L++AC ++L+T L
Sbjct: 99 NVQALLSGATLLNLQTLSQACCSFLQTHL 127
>SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 QICVSNCKSVFYAMFYGGLAECKQEI-EVPDVEPSAFLALLKYIYCDEIQLEADTVLSTL 407
++ +++ F+AMF G L+E +Q + + +++ A L++++Y EI++ D V L
Sbjct: 56 RVVLASSSPYFFAMFTGELSESRQTVVTLKEIDSLALELLIEFVYIAEIEVTEDNVQVLL 115
Query: 408 YVAKKYIXPHLAKACVNYLETSL 476
A + AC ++L+ L
Sbjct: 116 PAANLLQLNEVRDACCDFLKAQL 138
>SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 306 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
IE+PDV + FL LL+YIY D L+ L +A ++ LA C ++ S+
Sbjct: 112 IELPDVPLAPFLILLEYIYTDSCNLKDTNAREVLVLADRFCLDGLAARCEQFIIDSM 168
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 100 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
LDP V+ N L+SDITF+V +PAH+ VL T S
Sbjct: 46 LDPEAAHRSAWVKSTKDLFLNKALLSDITFVVKGVS----VPAHRVVLITRS 93
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 306 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
IE+PDV + FL LL+YIY D L+ L +A ++ LA C ++ S+
Sbjct: 334 IELPDVPLAPFLILLEYIYTDSCNLKDTNAREVLVLADRFCLDGLAARCEQFIIDSM 390
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 100 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
LDP V+ N L+SDITF+V +PAH+ VL T S
Sbjct: 268 LDPEAAHRSAWVKSTKDLFLNKALLSDITFVVKGVS----VPAHRVVLITRS 315
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 219 YTSTQICVSNCKSVFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTV 395
+ + +I ++ F A+F +AE QEI + D+ A+LKY+YC ++ L
Sbjct: 41 FPAHKIVLAAKSDYFKALFTTEMAEKNCQEISL-DISTRTLKAILKYVYCGDVSLNVSNA 99
Query: 396 LSTLYVAKKYIXPHLAKACVNYLETSLT 479
S A + HL K L+ ++T
Sbjct: 100 RSVFVAADYLMMDHLKKRAAAILKRTIT 127
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEAD 389
K + +I VS F +F GGL E + + + ++ F ALL +IY I + +
Sbjct: 43 KQFPIHKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEE 102
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSL 476
V L AK + K C ++L L
Sbjct: 103 NVQQLLPAAKMLQLDAVEKCCCDFLMRQL 131
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 FYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
F AMF G L E K I + + A ALL Y+Y I++ D V L A + P
Sbjct: 108 FRAMFTGNLLESGKNRILLKGIAGVALQALLDYVYTSSIEIFDDNVEEVLNAACAFQIPE 167
Query: 438 LAKACVNYLETSL 476
+ C +L+ L
Sbjct: 168 IINVCSEFLKEQL 180
>SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16)
Length = 501
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 130 TVRERNAAMFNNQLMSDITFIVGAPGHTK-IIPAHKYVLATASQSSMLCFMEVWQNVNKK 306
T++++ M+ N +SD+ F+ + G + IIPAH+Y LA S F + W K
Sbjct: 70 TIKKQGKYMWKNPYLSDVEFVCTSAGVQEVIIPAHRYALAVGSPVFKTNFEDRWSAEKLK 129
Query: 307 L 309
L
Sbjct: 130 L 130
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 225 STQICVSNCKSVFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIYCDEIQLEADTVLS 401
S ++ ++ S FY+MF G++E Q I + +V+ + L++Y Y I++ + V +
Sbjct: 49 SHRLILAANSSYFYSMFTSGMSETAQNRINLKEVDATVVRQLIEYCYTSTIEINENNVQN 108
Query: 402 TLYVAKKYIXPHLAKACVNYLETSL 476
L + + + C ++L+ L
Sbjct: 109 LLSIGNLLQFTTVVETCSDFLKKQL 133
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/83 (20%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 231 QICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTL 407
++ +++C + F++MF + E QE I + + + + L+ ++Y +I + D + S L
Sbjct: 49 RVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVIQLINFMYTRKITITIDNIESLL 108
Query: 408 YVAKKYIXPHLAKACVNYLETSL 476
+ + + AC +++ L
Sbjct: 109 TASAVFQLDPVVYACCEFMKRHL 131
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIY---CDEIQLEADTVLSTLYVAKKY 425
VF AMF + E ++ +E+ D++P F +LK++Y +IQ AD +L+ A KY
Sbjct: 247 VFSAMFEHEMEESRKGRVEILDIDPDVFQEMLKFVYTGNTPQIQGMADDLLA---AADKY 303
Query: 426 IXPHLAKACVNYLETSLT 479
L C + L ++LT
Sbjct: 304 DLERLKVMCEDVLCSNLT 321
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 258 VFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEI----QLEADTVLSTL 407
V AMF G AE +EI++ D AF+ LL+Y+Y D++ L+ D L TL
Sbjct: 440 VMAAMFGGSFAESSNEEIKLKDTPLKAFIGLLEYLYTDKLSPHESLDEDKQLLTL 494
>SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23)
Length = 998
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 303 EIEVPDVEPSAFLALLKYIYCDEIQL--EADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
E+E+ DV L L+K++Y D+ Q+ E +++ ++ + KY L C L +S+
Sbjct: 805 ELELSDVSVDVGLTLMKWVYTDKAQIPKEESFLINLVHASNKYRLKDLRLRCEKILMSSV 864
Query: 477 T 479
T
Sbjct: 865 T 865
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 261 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHL 440
F AMF G +A + + V ++ +A LL +IY ++ + + V + + +
Sbjct: 59 FMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIYQGKLLITEENVEDIFCGSCLLLLDTV 118
Query: 441 AKACVNYLETSLT 479
AC +++ LT
Sbjct: 119 THACCKFIQERLT 131
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
K++ + +I ++ FY +F + E +++ ++ S +L Y+Y EI +
Sbjct: 39 KEFPAHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYLYTGEITVTEL 98
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
+ A + P L YLE +T
Sbjct: 99 NAEDLIASANYLLIPRLKGIACKYLERHMT 128
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 160 NNQLMSDITFIV-GAPGHTKIIPAHKYVLATAS 255
NNQ MSD+TF+V G P + HK +LATAS
Sbjct: 485 NNQEMSDVTFVVEGEPFY-----GHKIILATAS 512
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 31.1 bits (67), Expect = 0.49
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 267 AMFYGG--LAECKQEIEVPDVEPSAFLALLKYIYCDEI-QLEADTVLSTLYVAKKYIXPH 437
AMF G L +Q + + D FLALL+++Y L D L + +A + P
Sbjct: 477 AMFMEGHFLEGGRQSVRLRDTNHDHFLALLEFLYTGRCPNLFLDDALGVIALANFFCLPR 536
Query: 438 LAKAC 452
L +C
Sbjct: 537 LVASC 541
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
F AMF + E +QE + + ++PS +L ++Y I+++ V L + I
Sbjct: 66 FMAMFTTDMIEKEQERVILKKLKPSVVKEILDFLYTGRIEIDNKNVRDLLEASSFLIISS 125
Query: 438 LAKACVNYLETSL 476
+ C +LE L
Sbjct: 126 VTDKCWQFLEEYL 138
>SB_30686| Best HMM Match : BTB (HMM E-Value=0.52)
Length = 137
Score = 30.3 bits (65), Expect = 0.86
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 306 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
+ P F +++Y+Y +I+ + T TL +A+ L AC + SL
Sbjct: 10 VRKPGFRHDVFREVIRYLYTGKIEFQNSTAFETLRIAEDLEISDLQHACEQHFMDSL 66
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 106 PNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASQSS 264
P+ T T E N + ++ ++SD GH K+ H+ L+++S SS
Sbjct: 363 PSIHLTNATKNESNGLLDHDLMLSDSDDSDDEQGHHKVPKPHRKTLSSSSGSS 415
>SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84)
Length = 1737
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Frame = -3
Query: 366 HSKYTLVKQGT--QMALHLEPQFLVYILPNLHKT*HRRLT------CSC*HI-FVCWYNL 214
H + L K + Q ALH L+ ++ N+ K H RLT C C I VC NL
Sbjct: 1332 HKRLVLFKDSSYQQTALHFLASSLLEVMENMSKNEHIRLTFQKDMLCECIRIVLVCLRNL 1391
>SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 303 EIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKY 425
E+ DV AFLAL+ IY D+ EA+ + + + Y
Sbjct: 201 EVTKEDVISDAFLALIGAIYLDQGSSEANKFVRDFLITQLY 241
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 27.1 bits (57), Expect = 8.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 225 WYNLCVSWGSDNK 187
W++ C++WGSD K
Sbjct: 1638 WHHFCLNWGSDGK 1650
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,571,347
Number of Sequences: 59808
Number of extensions: 299333
Number of successful extensions: 736
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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