Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0174.Seq
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 45 3e-05
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 39 0.002
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 39 0.002
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 31 0.33
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 31 0.33
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 31 0.33
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 31 0.57
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 30 0.76
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 30 0.76
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 30 0.76
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 1.3
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 29 1.7
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 27 5.3
U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm recep... 27 7.0
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 27 9.3
U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical p... 27 9.3
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 27 9.3
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 27 9.3
AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math... 27 9.3
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 4/77 (5%)
Frame = +3
Query: 258 VFYAMFYGGLA----ECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKY 425
VF AMF GGL E EIE+PDVEPSAFLALLK++Y DE+++EA++V++TLY AKKY
Sbjct: 217 VFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEAESVMTTLYTAKKY 276
Query: 426 IXPHLAKACVNYLETSL 476
P + K CV +L+ L
Sbjct: 277 AVPAMEKECVRFLKQRL 293
Score = 50.4 bits (115), Expect = 7e-07
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 112 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 255
WQA K T+RER M+ N+ ++D+ F+VG + IPAHK+VL+ S
Sbjct: 168 WQADKKTLRERIEHMYCNETLADVFFVVGIDDSRQRIPAHKFVLSIGS 215
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
K + ++ +S C F +MF +AEC +EI + ++EP AL+++ Y I ++
Sbjct: 65 KRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDS 124
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSL 476
V L A + AC +YL+ L
Sbjct: 125 NVQDILPAACLLQIHEVQTACCDYLKKQL 153
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 SPRTHKDYTSTQICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEI 374
S H+ + ++ +S S F AMF GGL E Q I + +V+ L+ Y+Y +
Sbjct: 75 SDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRM 134
Query: 375 QLEADTVLSTLYVAKKYIXPHLAKACVNYL 464
+++ V + L A + AC ++
Sbjct: 135 RIDEQNVQTILATASLLQLTCVRDACARFM 164
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 SPRTHKDYTSTQICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEI 374
S H+ + ++ +S S F AMF GGL E Q I + +V+ L+ Y+Y +
Sbjct: 75 SDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRM 134
Query: 375 QLEADTVLSTLYVAKKYIXPHLAKACVNYL 464
+++ V + L A + AC ++
Sbjct: 135 RIDEQNVQTILATASLLQLTCVRDACARFM 164
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 297 KQEIEVPD-VEPSAFLALLKYIYCDEIQL--EADTVLSTLYVAKKYIXPHLAKACVNYLE 467
K EI++ D V+ AF +++IY DEI L E + +L A + L CV L
Sbjct: 100 KSEIQISDDVDFEAFHVAIRWIYTDEIDLKMEDEKLLKVCETATSFRLEQLKNVCVQQLG 159
Query: 468 TSL 476
L
Sbjct: 160 ARL 162
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 148 AAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLA 246
+++ SD+TF A K +PAHKYVLA
Sbjct: 54 SSLLEKPRFSDVTFKF-AGNSLKSVPAHKYVLA 85
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.33
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 261 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPH 437
F MF L E +EI + D+ ALL + Y E+++ V S + A +
Sbjct: 76 FRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNVQSIMLGANFFQMLE 135
Query: 438 LAKACVNYLETSL 476
+ + C N+L T L
Sbjct: 136 VVQHCGNFLLTRL 148
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIE-VPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXP 434
VF AMF + E + V D+EP LL Y+Y + + S + A KY
Sbjct: 253 VFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQMAQSLIAAADKYQLD 312
Query: 435 HLAKACVNYLETSLT 479
L C L LT
Sbjct: 313 RLKVMCEQALCYQLT 327
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIE-VPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXP 434
VF AMF + E + V D+EP LL Y+Y + + S + A KY
Sbjct: 295 VFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQMAQSLIAAADKYQLD 354
Query: 435 HLAKACVNYLETSLT 479
L C L LT
Sbjct: 355 RLKVMCEQALCYQLT 369
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 297 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADT--VLSTLYVAKKYIXPHLAKACVNYL 464
++ IE+ D P++ A++++IY I+ + D + + +A+KY L C +L
Sbjct: 266 EKRIEILDFSPTSVRAMVEFIYAGVIKSDIDVYQAVDVMQIAEKYQILALKMTCEQHL 323
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 30.3 bits (65), Expect = 0.76
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 297 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
K+++ + P F L Y+Y + ++ +V L A ++ L C YL+ L
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 30.3 bits (65), Expect = 0.76
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 297 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
K+++ + P F L Y+Y + ++ +V L A ++ L C YL+ L
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 30.3 bits (65), Expect = 0.76
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 297 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLETSL 476
K+++ + P F L Y+Y + ++ +V L A ++ L C YL+ L
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 303 EIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYL 464
EI++PD F L+ Y D + DTV L +A+ Y + K C Y+
Sbjct: 594 EIKLPDSSADHFQNFLEACYGDP-SINDDTVHGILKIAQSYEAAGIVKRCEEYV 646
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 462 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 298
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 91 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 145
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 462 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 298
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 91 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 145
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 462 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 298
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 124 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 178
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 462 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 298
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 124 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 178
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 405 ELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLVYILPNL 280
+ +I+ +PP G+ + + + K QMAL L + + LP L
Sbjct: 208 QYLIELIPPGGWSNCSHDIPKTAIQMALDLRNMYSDFPLPYL 249
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 261 FYAMFYGGLAECKQE---IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIX 431
F MF L E + IE D+ ALL + Y E+++ V S + A +
Sbjct: 76 FRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135
Query: 432 PHLAKACVNYLETSL 476
+ + C N+L T L
Sbjct: 136 LEVVQHCGNFLLTRL 150
>U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm receptor
protein 47 protein.
Length = 331
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 183 YFYCRSPRTHKDYTSTQICVSNCKSVFYAMFYG 281
Y SP+T K +T I S C S+F+ + G
Sbjct: 115 YLVLVSPKTAKKFTGKGILFSLCVSIFFGVIDG 147
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 441 PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMAL 322
PD+ + WL RE + +PP F+ ++ +K + L
Sbjct: 363 PDDFVFSRWLCREKKLAVIPPSAFYSARDNKLKNSNMVRL 402
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 441 PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMAL 322
PD+ + WL RE + +PP F+ ++ +K + L
Sbjct: 380 PDDFVFSRWLCREKKLAVIPPSAFYSARDNKLKNSNMVRL 419
>U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical
protein C37C3.9 protein.
Length = 313
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +3
Query: 300 QEIEVPDVEPSAFLALLKYIYCDEIQLEADT-----VLSTLYVAKKYIXPHLAKACVNYL 464
+++ + D P L L+ I + + L D V + L + KY+ +L + CV+YL
Sbjct: 94 KQLNILDESPEDILKLITVISPNSLGLYPDVIDEQNVCTVLRLCDKYLMTNLKQNCVDYL 153
Query: 465 E 467
+
Sbjct: 154 K 154
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 121 TKPTVRERNAAM--FNNQLMSDITFIVGAPGHTKIIPAHKYV 240
T PT+ E A F NQ +D T V + H +++P KY+
Sbjct: 424 TLPTLPEEGEASISFWNQFETDCTITVMSGIHKRVLPHDKYL 465
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 121 TKPTVRERNAAM--FNNQLMSDITFIVGAPGHTKIIPAHKYV 240
T PT+ E A F NQ +D T V + H +++P KY+
Sbjct: 385 TLPTLPEEGEASISFWNQFETDCTITVMSGIHKRVLPHDKYL 426
>AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math
domain containingprotein 19 protein.
Length = 418
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 300 QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYL 464
+ + + ++ + F LL+ IY E +E T + LY+A K + + CV++L
Sbjct: 276 RHVTLQNISAADFQNLLEVIY-GESDVEDHTAHAILYLAHKLEMKLIVQKCVDFL 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,936
Number of Sequences: 27780
Number of extensions: 224305
Number of successful extensions: 518
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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