Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0174.Seq
(479 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 42 3e-04
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 39 0.002
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 38 0.005
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 38 0.005
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 37 0.006
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 36 0.014
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 36 0.019
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 33 0.075
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 32 0.23
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 31 0.30
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 31 0.30
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 30 0.70
At3g05675.2 68416.m00633 expressed protein 30 0.70
At3g05675.1 68416.m00632 expressed protein 30 0.70
At1g64355.1 68414.m07293 expressed protein 30 0.70
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 1.2
At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase, p... 29 2.1
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 28 3.7
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 27 6.5
At4g27570.1 68417.m03960 glycosyltransferase family protein cont... 27 6.5
At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B li... 27 8.7
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
+ + + +IC+ F AMF GG E ++IE+P+++ F ++++IY + + +
Sbjct: 550 RTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDITNE 609
Query: 390 TVLSTLYVAKKYIXPHLAKACVNYLETSLT 479
L A +Y+ L + C + +T
Sbjct: 610 ISKDLLRAADQYLLEGLKRLCEYTIAQDIT 639
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 261 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEI 374
F +MFY LAE ++ + D+EP F ALL ++Y D +
Sbjct: 230 FRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSL 267
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 252 KSVFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYI 428
+ F AMF GG E ++IE+P+++ F ++++IY + + + L A +Y+
Sbjct: 515 EDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDITNEISKDLLRAADQYL 574
Query: 429 XPHLAKACVNYLETSLT 479
L + C + LT
Sbjct: 575 LEGLKRLCEYTIAQYLT 591
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 213 KDYTSTQICVSNCKSVFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEAD 389
K + + +I + +F AMF G E Q +E+P++ F ++K+IY I +
Sbjct: 549 KQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYSGRINIAKH 608
Query: 390 TVLSTLYVAKKYIXPHLAKAC 452
L A +Y+ L + C
Sbjct: 609 LAKDLLVAADQYLLEGLKRQC 629
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLST 404
VF + F E ++IEV D+EP F ALL YIY D + +A++ S+
Sbjct: 240 VFESEFLDVTGEEDRDIEVTDMEPKVFKALLHYIYKDALIEDAESSSSS 288
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 35.9 bits (79), Expect = 0.014
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 VFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXP 434
VF AM + E I++ DV A + Y+Y E L+ L +++KY
Sbjct: 93 VFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMACDLLVMSEKYQVK 152
Query: 435 HLAKACVNYLETSLT 479
HL C +L T L+
Sbjct: 153 HLKSYCERFLVTKLS 167
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 35.5 bits (78), Expect = 0.019
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 219 YTSTQICVSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTV 395
Y + ++ ++ VF A F+G + + I + D+EPS F A+L +IY D + +
Sbjct: 205 YKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEIT 264
Query: 396 LSTLYVAKKYIXPHLAKACVNY 461
ST + + HL A Y
Sbjct: 265 GSTSASSFTNMIQHLLAAADLY 286
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 33.5 bits (73), Expect = 0.075
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 255 SVFYAMFYGGL-AECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIX 431
+VF A +G L +E I + DV+ F LL +IY DE+ D + + L A +
Sbjct: 225 AVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVA 284
Query: 432 PHLAKACVNY 461
HL A Y
Sbjct: 285 QHLLAAADRY 294
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 31.9 bits (69), Expect = 0.23
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 240 VSNCKSVFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEA-DTVLSTLYV 413
+S +VF +MF+ L E + I + D+ + +ALL Y+Y + Q E L+ L
Sbjct: 179 LSASSTVFKSMFHHDLMEKESSTIHIDDMSRESCMALLSYLYGNITQEEFWKHRLALLGA 238
Query: 414 AKKYIXPHLAKAC 452
A KY L AC
Sbjct: 239 ANKYDITDLKAAC 251
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 31.5 bits (68), Expect = 0.30
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 291 ECK----QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVN 458
ECK + I +PD+ +LL+++Y ++ + S A KY +L C N
Sbjct: 59 ECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRN 118
Query: 459 YLETSLT 479
+ SL+
Sbjct: 119 HFIASLS 125
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 31.5 bits (68), Expect = 0.30
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 291 ECK----QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVN 458
ECK + I +PD+ +LL+++Y ++ + S A KY +L C N
Sbjct: 59 ECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRN 118
Query: 459 YLETSLT 479
+ SL+
Sbjct: 119 HFIASLS 125
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 30.3 bits (65), Expect = 0.70
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 261 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEI 374
F + F+ E+ + D+EP F ALL+++Y D +
Sbjct: 223 FKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYKDSL 260
>At3g05675.2 68416.m00633 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 357 IYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLE 467
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At3g05675.1 68416.m00632 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 357 IYCDEIQLEADTVLSTLYVAKKYIXPHLAKACVNYLE 467
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At1g64355.1 68414.m07293 expressed protein
Length = 199
Score = 30.3 bits (65), Expect = 0.70
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 314 NLNFLFTFCQTSIKHSIED*LAVANTYLCAGIIFVCPGAPTIKVISDISWLLNIAAF 144
N +F F F +T K++ D L V+ G+ V P APTI S S L ++ F
Sbjct: 38 NKSFFFHFTETKEKNARRDYLRVSIVCDAGGMFPVDPWAPTIDSQSIASQLFAVSLF 94
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 191 IKVISDISWLLNIAAFLSRTVGFVACQLGSRVAVPGGAGELAGDVVALDD 42
+KVI D S + ++ +RT+ FV G VA G GE V+ L D
Sbjct: 574 VKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPD 623
>At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967);
1-aminocyclopropane-1-carboxylate oxidase homolog -
Arabidopsis thaliana, PIR:S59548
Length = 370
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 289 QNVNKKLRFQM*SHLRSLLY*S---IFTVMKSNWRQIL 393
Q+ K RF H R ++Y S +FT MK++WR +
Sbjct: 122 QDAELKKRFYSRDHTRKMVYYSNLDLFTAMKASWRDTM 159
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 285 LAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTV--LSTLY 410
L+EC+ IE+PD+ + L +L C + + T+ L LY
Sbjct: 765 LSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLY 808
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 285 LAECKQEIEVPDVEPSAFLALLKYIYCDEI 374
L+ CK +EVPD+ + L L YC +
Sbjct: 632 LSRCKYLVEVPDLSKATNLEELNLSYCQSL 661
>At4g27570.1 68417.m03960 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 453
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 387 LPPVGFHHSKYTLVKQGTQMALHLEPQFLVYILPNL 280
+PP G+ SK L KQ LEP + + PNL
Sbjct: 154 VPPPGYPSSKVLLRKQDAYTMKKLEPTNTIDVGPNL 189
>At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 651
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 45 IKCDHVASEFASTSWYRHPGSQLASDKAYSSREKRCYV--Q*PANV*YY 185
+ C H++ E HP +AS+ + EK C + Q P N+ YY
Sbjct: 162 VDCVHLSKEVNHPCHPSHPLKLIASESLTDNAEKICLLCEQQPENMLYY 210
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,068,856
Number of Sequences: 28952
Number of extensions: 197886
Number of successful extensions: 491
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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