Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0172.Seq
(439 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 99 2e-21
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 99 2e-21
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 99 2e-21
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 99 2e-21
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 99 2e-21
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 52 3e-07
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 52 3e-07
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 36 0.018
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 36 0.018
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 36 0.018
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = -3
Query: 266 QGQVRLGALVHRXTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGN 87
+G+ RLG LV R TCT LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGS 249
Query: 86 KS 81
KS
Sbjct: 250 KS 251
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 406 SGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKS 254
+GTNTVTKL+ KKAQLVVIAHDVDP+E VLFLPALCRKMGVPYCIVKGK+
Sbjct: 143 AGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = -3
Query: 266 QGQVRLGALVHRXTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGN 87
+G+ RLG LV R TCT LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGS 249
Query: 86 KS 81
KS
Sbjct: 250 KS 251
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 406 SGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKS 254
+GTNTVTKL+ KKAQLVVIAHDVDP+E VLFLPALCRKMGVPYCIVKGK+
Sbjct: 143 AGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = -3
Query: 266 QGQVRLGALVHRXTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGN 87
+G+ RLG LV R TCT LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGS 249
Query: 86 KS 81
KS
Sbjct: 250 KS 251
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 406 SGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKS 254
+GTNTVTKL+ KKAQLVVIAHDVDP+E VLFLPALCRKMGVPYCIVKGK+
Sbjct: 143 AGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = -3
Query: 266 QGQVRLGALVHRXTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGN 87
+G+ RLG LV R TCT LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGS 249
Query: 86 KS 81
KS
Sbjct: 250 KS 251
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 406 SGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKS 254
+GTNTVTKL+ KKAQLVVIAHDVDP+E VLFLPALCRKMGVPYCIVKGK+
Sbjct: 143 AGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/62 (66%), Positives = 54/62 (87%)
Frame = -3
Query: 266 QGQVRLGALVHRXTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGN 87
+G+ RLG LV R TCT LALT V++ D+A+F KV+EA+KTNFNER+EE+R+HWGGG+LG+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGS 249
Query: 86 KS 81
KS
Sbjct: 250 KS 251
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1
Query: 406 SGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKS 254
+GTNTVTKL+ KKAQLVVIAHDVDP+E VLFLPALCRKMGVPYCIVKGK+
Sbjct: 143 AGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKA 193
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = -1
Query: 409 RSGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKSA 251
R G N TK + A +VV+A D +PIE +L LP LC VPY V+ K A
Sbjct: 35 RKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQA 87
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/53 (45%), Positives = 30/53 (56%)
Frame = -1
Query: 409 RSGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPYCIVKGKSA 251
R G N TK + A +VV+A D +PIE +L LP LC VPY V+ K A
Sbjct: 35 RKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQA 87
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 409 RSGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPY 275
R+G V + + + + A DV P++ + LPA+C + G+PY
Sbjct: 68 RNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 409 RSGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPY 275
R+G V + + + + A DV P++ + LPA+C + G+PY
Sbjct: 68 RNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 409 RSGTNTVTKLVXNKKAQLVVIAHDVDPIEXVLFLPALCRKMGVPY 275
R+G V + + + + A DV P++ + LPA+C + G+PY
Sbjct: 68 RNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,010,602
Number of Sequences: 53049
Number of extensions: 291176
Number of successful extensions: 834
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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