Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0170.Seq
(398 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 106 1e-22
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 98 6e-20
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 96 3e-19
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 91 1e-17
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 90 1e-17
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 89 2e-17
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 89 2e-17
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 89 2e-17
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 89 4e-17
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 86 2e-16
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 86 3e-16
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 82 3e-15
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 82 4e-15
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 81 6e-15
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 74 9e-13
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 73 2e-12
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 65 4e-10
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 61 9e-09
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 54 1e-06
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 53 2e-06
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 51 7e-06
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 49 3e-05
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 49 3e-05
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 46 2e-04
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 46 2e-04
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 46 4e-04
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 45 6e-04
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 43 0.003
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.006
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 42 0.006
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 41 0.010
UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;... 40 0.018
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 38 0.055
UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA... 38 0.096
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 36 0.22
UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1; ... 34 0.89
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 34 0.89
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 33 1.6
UniRef50_A0CBS1 Cluster: Chromosome undetermined scaffold_165, w... 33 2.1
UniRef50_Q9W2R5 Cluster: CG15225-PA; n=1; Drosophila melanogaste... 33 2.7
UniRef50_UPI00003ACDA3 Cluster: UPI00003ACDA3 related cluster; n... 32 3.6
UniRef50_Q9VDY5 Cluster: CG5237-PA; n=2; Sophophora|Rep: CG5237-... 32 3.6
UniRef50_Q0U046 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 3.6
UniRef50_A0LI80 Cluster: Plasmid maintenance system antidote pro... 32 4.8
UniRef50_Q32KD0 Cluster: IP03879p; n=3; Drosophila melanogaster|... 32 4.8
UniRef50_Q9VM88 Cluster: CG11321-PA, isoform A; n=2; Drosophila ... 31 8.3
UniRef50_Q8IPJ3 Cluster: CG11321-PB, isoform B; n=1; Drosophila ... 31 8.3
UniRef50_Q29P13 Cluster: GA10917-PA; n=1; Drosophila pseudoobscu... 31 8.3
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 106 bits (255), Expect = 1e-22
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
+VDIAIPCN K +HS+GLMWW+LAREVLR+RG + R+ W+V+ DL+FYRDPEE EK+EQ
Sbjct: 156 YVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQ 215
Query: 183 QAKEQ 197
A E+
Sbjct: 216 AAAEK 220
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 97.9 bits (233), Expect = 6e-20
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
++D+AIPCN +S+GLMWWLL REVLRLRG + R+ W+V+ DLFFYRDPEE EK+EQ
Sbjct: 156 YIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMPDLFFYRDPEEVEKEEQ 215
Query: 183 QAKE 194
E
Sbjct: 216 AKAE 219
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 95.9 bits (228), Expect = 3e-19
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
FVDIAIPCN + +SI +M+WLLAREVLRLRG +PR WDV VDLFFYRDPEE+ K E+
Sbjct: 176 FVDIAIPCNDRRRYSISMMYWLLAREVLRLRGTIPRSVPWDVKVDLFFYRDPEEALKHEE 235
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 90.6 bits (215), Expect = 1e-17
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
+VDIAIPCN K +HS+G+MWW+L EV R+ G + R+ W+V+ D FYRDPEE EK++Q
Sbjct: 236 YVDIAIPCNNKGAHSVGVMWWMLVPEVRRISGTISREHPWEVMTDPCFYRDPEEIEKEKQ 295
Query: 183 QAKEQ 197
A E+
Sbjct: 296 AAAEK 300
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 90.2 bits (214), Expect = 1e-17
Identities = 37/48 (77%), Positives = 45/48 (93%)
Frame = +3
Query: 51 GLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 194
GL+WWLLAREVLRLRG++PR+ +W+VVVDLFFYRDPEE+EK+EQ KE
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWEVVVDLFFYRDPEEAEKEEQAQKE 48
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 89.4 bits (212), Expect = 2e-17
Identities = 34/52 (65%), Positives = 48/52 (92%)
Frame = +3
Query: 42 HSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKEQ 197
HSIGLMWW+L+REVLRLRG + RD W+++VDL+F+RDPEE+EK+EQ+A+++
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWEIMVDLYFFRDPEEAEKEEQEARDR 99
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL-PRDQRWDVVVDLFFYRDPEESEKDE 179
FVD+AIPCN + HSIGL+W+LLAREVLRLRG L R Q W ++ DL+FYRDPEE E +
Sbjct: 155 FVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYRDPEEVE--Q 212
Query: 180 QQAKE 194
Q A+E
Sbjct: 213 QVAEE 217
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 89.4 bits (212), Expect = 2e-17
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQ 185
VDIAIP N K SIGL+W+LLAREVLR+RG L R WDV+ DL+FYRDPEE E++E+
Sbjct: 159 VDIAIPTNNKGRKSIGLIWYLLAREVLRVRGTLSRSAPWDVMPDLYFYRDPEEVEREEEA 218
Query: 186 AK 191
K
Sbjct: 219 KK 220
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 88.6 bits (210), Expect = 4e-17
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESE-KDE 179
FVDI IP N K HSIG ++WLLAR VL++RG + Q+WDV+VDLFFYR+PEE++ +DE
Sbjct: 160 FVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDE 219
Query: 180 QQAKEQ 197
+A Q
Sbjct: 220 DEAGPQ 225
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 86.2 bits (204), Expect = 2e-16
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = +3
Query: 33 KSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKEQ 197
K +HS+GL+WW+LAREVLR+RG + R+ W+V+ DL+FYRDPEE EK+EQ A E+
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 55
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 85.8 bits (203), Expect = 3e-16
Identities = 36/65 (55%), Positives = 50/65 (76%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
+VDI IP N K +SIG ++WLLAR VL++RG + +WDV+VDLFFYRDPEE+++ E+
Sbjct: 78 YVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEE 137
Query: 183 QAKEQ 197
+A Q
Sbjct: 138 EAPAQ 142
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 82.2 bits (194), Expect = 3e-15
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
+VDIAIPCN K SI LM+WLLAREVL LR L R WDV+VD FF+RDPE+ E+ +
Sbjct: 156 YVDIAIPCNNKGKESIALMYWLLAREVLYLRDQLKRWMPWDVLVDTFFWRDPEQFEQKPE 215
Query: 183 Q 185
+
Sbjct: 216 E 216
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 81.8 bits (193), Expect = 4e-15
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQ 185
VDIAIP N K+ SIG +++LLAR VL++RG + WDV+VDLFFYRDPEE E EQ+
Sbjct: 180 VDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYRDPEELEAKEQE 239
Query: 186 AKE 194
+E
Sbjct: 240 EEE 242
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 81.4 bits (192), Expect = 6e-15
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEK 173
+VD IPCNTK+ +S+GL+ WLL REVLRLRG L R Q W V+ DLFFYRD + K
Sbjct: 154 YVDCVIPCNTKNKNSMGLVMWLLTREVLRLRGALTRTQEWSVLPDLFFYRDAADEAK 210
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 74.1 bits (174), Expect = 9e-13
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQ 182
F+D+AIPCN K+ SIGL++WLLAREVLRL+G + R + WDV DLF PEE +E+
Sbjct: 161 FIDVAIPCNNKTPMSIGLIYWLLAREVLRLKGSISRTEEWDVKPDLFVAL-PEEIPDEEE 219
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 73.3 bits (172), Expect = 2e-12
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3
Query: 60 WWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKEQ 197
WW+LAREVLR+RG + R+ W+V+ DL+FYRDPEE EK+EQ A E+
Sbjct: 1 WWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEK 46
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 65.3 bits (152), Expect = 4e-10
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEK--D 176
+VDI IP + + SI +++WLLAREV LRG L +D+ WDV+VDLF++++ +
Sbjct: 185 YVDIPIPVGNRETKSISMIYWLLAREVKILRGELNKDEEWDVLVDLFYHKEITNDQLGIT 244
Query: 177 EQQAKEQXXXXXXXXXXXXXHEDW 248
+ Q K++ +DW
Sbjct: 245 DNQVKQEAEDHEQQAEGEKAEKDW 268
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 60.9 bits (141), Expect = 9e-09
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRD--PEESEKDE 179
VDI IPCN +SI LM W+LAREV R+ G+ PR Q DV++DLF R+ E E E
Sbjct: 157 VDIGIPCNN-DKYSIALMLWMLAREVRRIWGLDPRSQPGDVIMDLFLMREHVDEPPEGPE 215
Query: 180 QQAKE 194
+A+E
Sbjct: 216 GEAQE 220
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFF 146
+VDI I N K H+IG ++WLL VL +R + +WDV+VDLFF
Sbjct: 107 YVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIALGHKWDVMVDLFF 154
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESE 170
FVDIAIP N + HS+ ++W LL R VLRL+G ++ +FFY DPE++E
Sbjct: 112 FVDIAIPGNVRGRHSVVILWCLLCRTVLRLKG-----GDLSMMPGMFFYHDPEKAE 162
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 51.2 bits (117), Expect = 7e-06
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLF 143
++D IP N + S S+ L++W+LARE LR RGV+ +D++ V V+ F
Sbjct: 147 YIDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQLKVPVEEF 193
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 49.2 bits (112), Expect = 3e-05
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +3
Query: 9 DIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQA 188
DIA PCN K HS+GLM W+LA E L + W D++FYRDPE+ ++ + A
Sbjct: 111 DIA-PCNIKGVHSVGLMCWVLAGEALSFLNT--HEWSWP---DVYFYRDPEKIKEGQAAA 164
Query: 189 KE 194
++
Sbjct: 165 EK 166
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 49.2 bits (112), Expect = 3e-05
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVL 104
F+D+ IPCN K +S+ L++WLLAR+VLR RG L
Sbjct: 160 FIDLMIPCNNKGRNSLALVFWLLARQVLRERGEL 193
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 46.8 bits (106), Expect = 2e-04
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3
Query: 90 LRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQ 185
+RG + +WDV+VDLFFYRDPEE+++ E++
Sbjct: 161 MRGTILPGHKWDVMVDLFFYRDPEEAKEQEEE 192
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLF 143
++DIAIP N K +S L+ WLL +++L +G L ++ W+V V+ F
Sbjct: 149 YIDIAIPGNNKDRYSFALIIWLLTKKILIFKGELTKNCEWNVSVESF 195
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLF 143
FVD+ IP N K S+ +++WLLARE+L+ RG + ++ +D F
Sbjct: 149 FVDLIIPTNNKGRRSLAVIYWLLAREILKNRGTITSYDQFKYTIDDF 195
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 45.6 bits (103), Expect = 4e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYR 152
++D+ IP N K S+ L++W LAR++LR R V+P D V V F R
Sbjct: 179 YIDLIIPANNKGRKSLALLYWALARQILRERRVIPPDGDLAVPVSEFEMR 228
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 44.8 bits (101), Expect = 6e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 107
VD+ IP N + ++ L++WLLAREVLR+RG +P
Sbjct: 158 VDLIIPTNNRGRKALALIFWLLAREVLRIRGDIP 191
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 42.7 bits (96), Expect = 0.003
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +3
Query: 120 WDVVVDLFFYRDPEESEKDEQQAKEQ 197
W+V+ +L+FYRDPEE+EK+EQ A E+
Sbjct: 108 WEVMSNLYFYRDPEETEKEEQAAAEK 133
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 41.5 bits (93), Expect = 0.006
Identities = 14/31 (45%), Positives = 25/31 (80%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 95
+VD AIPCN ++++SI ++W+LL + VL ++
Sbjct: 60 YVDCAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 41.5 bits (93), Expect = 0.006
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESE 170
+D+ IP N + ++ ++WLLAREVL +RG + + +D F +D E E
Sbjct: 154 LDVIIPANNRGRGALAAIFWLLAREVLVIRGEVDETKPMKYEIDDFETKDVREDE 208
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 40.7 bits (91), Expect = 0.010
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 3 FVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQR 119
F+D+ IP N K ++ L+++LL RE L+ RGV+ D +
Sbjct: 150 FIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVITDDTK 188
>UniRef50_UPI0000D9C04A Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 136
Score = 39.9 bits (89), Expect = 0.018
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 158 RVTVEEQINHNIPALVTGKHTTKPQHFTCQQPPHQ 54
R++VE I H++P + TG T Q+F Q PPHQ
Sbjct: 100 RISVEVGIRHDLPRVFTGNGATHAQNFLSQHPPHQ 134
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 38.3 bits (85), Expect = 0.055
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRL 92
VD+ IP N K ++ L++WLLAREV RL
Sbjct: 181 VDLVIPTNNKGRKALSLVYWLLAREVSRL 209
>UniRef50_UPI0000D56263 Cluster: PREDICTED: similar to CG11321-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11321-PA, isoform A - Tribolium castaneum
Length = 2084
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRP 396
C +CSS F + P RR+VCP + V NCRRP
Sbjct: 1787 CVKCSSGFIANPRQRRLVCPDCKSVTCANCRRP 1819
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 36.3 bits (80), Expect = 0.22
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLP 107
VD+ +P N K ++ +++WLLA E L RG P
Sbjct: 223 VDLVVPTNNKGRKALSVVYWLLANETLDRRGAEP 256
>UniRef50_A0L6C2 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 523
Score = 34.3 bits (75), Expect = 0.89
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = -1
Query: 377 STHLVPGQTILLEQGVLQKQELQRVQQAGRYLQPMKPLAPVFIPVFMD 234
S+H V L+E G+ Q + L+RV Q+GR++Q + PLA F V ++
Sbjct: 431 SSHEVALDLSLMEYGIYQ-EALERVLQSGRFVQQVAPLAERFKQVAVE 477
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 34.3 bits (75), Expect = 0.89
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 283 RYRPACCTRCSSCFWST-PC--SRRMVCPGTR*VEHNCRR 393
+ RP CTRC CF+ T C S R + G+ EHNCRR
Sbjct: 367 KQRPLQCTRCY-CFYDTRACRSSERCISCGSSKQEHNCRR 405
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 33.5 bits (73), Expect = 1.6
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 6 VDIAIPCNTKSSHSIGLMWWLLAREV--LRLRGVLPRDQRWDVVVDLFFYRDPEESEK 173
VDIAIP N +S +I +++L+R + ++ L RD + V+LF +RD E E+
Sbjct: 162 VDIAIPMNNRSPSAIAAGFFILSRLINYMKTGAELVRDMK---EVELFLFRDSVELEQ 216
>UniRef50_A0CBS1 Cluster: Chromosome undetermined scaffold_165, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1857
Score = 33.1 bits (72), Expect = 2.1
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -1
Query: 398 LGRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQAGRYLQPMKPLAPV-FIPVFMDRSNY 222
L RRQ + H P Q I + G+ Q+Q+ Q++QQ QP+ P+ IP++M + +
Sbjct: 1681 LSRRQDFNMH--PLQPIQQQSGIQQQQQ-QQIQQQQAMQQPIHQPYPIPQIPMYMPQMSA 1737
Query: 221 FWFSWYHSXXXXXXXXXXXXFRVTVEEQINHNIPALVTGKHTTKPQHFTCQQPPHQTNRV 42
S S +++QI P L PQH QQPP Q +V
Sbjct: 1738 QMGSQLPSQMAPPMQQVQPP---QIQQQIQQ--PGLQQPMMHLHPQHSISQQPPVQQPQV 1792
>UniRef50_Q9W2R5 Cluster: CG15225-PA; n=1; Drosophila
melanogaster|Rep: CG15225-PA - Drosophila melanogaster
(Fruit fly)
Length = 239
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 177 HPFHFLQGHGRRTNQPQHPSAGHGEAHHEASTLHVPTTTTSNQ*SGK 37
+P+ + GHG + H S GHG HH +T TTTT G+
Sbjct: 140 YPYPY-PGHGGHSGSGGHDS-GHGGHHHHTTTTTTTTTTTKKPNHGQ 184
>UniRef50_UPI00003ACDA3 Cluster: UPI00003ACDA3 related cluster; n=1;
Gallus gallus|Rep: UPI00003ACDA3 UniRef100 entry -
Gallus gallus
Length = 89
Score = 32.3 bits (70), Expect = 3.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 289 RPACCTRCSSCFWSTPCSRRMVCP 360
+P CCT ++C W TPC + P
Sbjct: 60 QPLCCTEAATCSWITPCVKVQESP 83
>UniRef50_Q9VDY5 Cluster: CG5237-PA; n=2; Sophophora|Rep: CG5237-PA -
Drosophila melanogaster (Fruit fly)
Length = 2958
Score = 32.3 bits (70), Expect = 3.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 174 PFHFLQGHGRRTNQPQHPSAGHGEAHHEASTLHVPTTTTSN 52
P+H H + HP H HH S+ HV TT T++
Sbjct: 1359 PYHTHHHHPHGHHPYPHPHPHHHPHHHAGSSAHVATTATTS 1399
>UniRef50_Q0U046 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 375
Score = 32.3 bits (70), Expect = 3.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 174 PFHFLQGHGRRTNQPQHPSAGHGEAHHE 91
P F GHG +QP+H S HG HHE
Sbjct: 248 PHRFRPGHGHPHHQPEHMS--HGHHHHE 273
>UniRef50_A0LI80 Cluster: Plasmid maintenance system antidote
protein, XRE family; n=1; Syntrophobacter fumaroxidans
MPOB|Rep: Plasmid maintenance system antidote protein,
XRE family - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 371
Score = 31.9 bits (69), Expect = 4.8
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -1
Query: 329 LQKQELQRVQQAGRYLQPMKPLAPVFIPVFMDRSNYFWFSWYH 201
+Q+ R+ A R+L P K L + + + R+++FWFS++H
Sbjct: 227 VQELPKTRISAATRWLTPSKAL--IQLSLLYKRNDHFWFSFFH 267
>UniRef50_Q32KD0 Cluster: IP03879p; n=3; Drosophila
melanogaster|Rep: IP03879p - Drosophila melanogaster
(Fruit fly)
Length = 1312
Score = 31.9 bits (69), Expect = 4.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 168 HFLQGHGRRTNQPQHPSAGHGEAHHEASTLHVPT 67
H LQGH R+ NQ HP H+ H+PT
Sbjct: 76 HPLQGHERQQNQHHHPYQHQHHHHYHQHHPHLPT 109
>UniRef50_Q9VM88 Cluster: CG11321-PA, isoform A; n=2; Drosophila
melanogaster|Rep: CG11321-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 2594
Score = 31.1 bits (67), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRP 396
C +CSS F++ P +R++CP V CR+P
Sbjct: 2299 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKP 2331
>UniRef50_Q8IPJ3 Cluster: CG11321-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG11321-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 2922
Score = 31.1 bits (67), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRP 396
C +CSS F++ P +R++CP V CR+P
Sbjct: 2627 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKP 2659
>UniRef50_Q29P13 Cluster: GA10917-PA; n=1; Drosophila
pseudoobscura|Rep: GA10917-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 2406
Score = 31.1 bits (67), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 301 CTRCSSCFWSTPCSRRMVCPGTR*VE-HNCRRP 396
C +CSS F++ P +R++CP V CR+P
Sbjct: 2123 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKP 2155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,186,498
Number of Sequences: 1657284
Number of extensions: 6803612
Number of successful extensions: 23803
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 22878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23772
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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