Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0168.Seq
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   1.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   1.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   1.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   1.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   1.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.4  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 RVPPLSLFLSSCRRQP 303
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 RVPPLSLFLSSCRRQP 303
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 RVPPLSLFLSSCRRQP 303
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLALCHAEP 17


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 RVPPLSLFLSSCRRQP 303
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 350 RVPPLSLFLSSCRRQP 303
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 342 SFKLVFVKLPTTANNVARAISS 277
           S  L F  LPT A  VA  ISS
Sbjct: 470 SLSLAFNSLPTVALEVAGNISS 491


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 379 IMRHLPREVDPLVYNM 426
           IM H+   V+P++YN+
Sbjct: 340 IMFHINSAVNPILYNI 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,559
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)