Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0168.Seq
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 159 2e-39
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 52 2e-07
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 46 2e-05
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_56686| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.31
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 30 0.95
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 30 0.95
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 29 1.7
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 29 1.7
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 2.2
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 29 2.9
SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37) 29 2.9
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3) 28 3.8
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 5.1
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 5.1
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 28 5.1
SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 28 5.1
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 27 6.7
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 27 6.7
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 27 6.7
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056) 27 6.7
SB_44096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7) 27 8.9
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 27 8.9
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 8.9
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 27 8.9
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 159 bits (385), Expect = 2e-39
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
L+ EEKFIVKATNGPRYVVGCRRQ+DK KLK GTRVALDMTTLTIMR+LPREVDPLVY
Sbjct: 63 LKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVY 122
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
NMSHEDPG+++YS +GGL EQIR+LREVI
Sbjct: 123 NMSHEDPGNISYSDVGGLSEQIRELREVI 151
Score = 95.1 bits (226), Expect = 3e-20
Identities = 43/56 (76%), Positives = 52/56 (92%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 241
REKA +Y+KKL+EH+E+++RLKE R+QLKD TK+YDKSENDLKALQSVGQIVGEV
Sbjct: 7 REKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEV 62
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
LE + IV +T G Y V +DK LK VAL + ++ LP E D +
Sbjct: 92 LEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIA 151
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
+++E+ +V+Y+ IGG+ Q +++RE +
Sbjct: 152 MLTNEEKPNVSYAEIGGMDIQKQEIREAV 180
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/67 (22%), Positives = 39/67 (58%)
Frame = +2
Query: 38 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS 217
T+ + S ++P + + Y+K + + +E + + +D+ K+L K+ ++ ++K +QS
Sbjct: 24 TISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQS 83
Query: 218 VGQIVGE 238
V ++G+
Sbjct: 84 VPLVIGQ 90
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1
Query: 391 LPREVDPLVYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
LP ++DP V M E+ DVTYS IGG EQI +LREV+
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVV 100
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = +1
Query: 244 ETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYN 423
E + IV + G + V +DK+ L+ G V L+ ++ L + DP+V
Sbjct: 309 EIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTV 368
Query: 424 MSHEDPGDVTYSAIGGLXEQIRQLREVI 507
M E +Y+ IGGL QI++++E +
Sbjct: 369 MKLEKAPQESYADIGGLDTQIQEIKESV 396
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 400 EVDPLVYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
EVDPLV M E D TY +GGL +QI++++EVI
Sbjct: 158 EVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVI 193
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 47 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
+S D + L + A +D K +E +E E RL+ D+L + KQ +K+E++LKAL+
Sbjct: 1590 SSPFDFDEL-DGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALK 1644
>SB_56686| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1888
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 65 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 199
EP+ E+ Q Y + H+E+ ++LKE R + L YD + D
Sbjct: 1022 EPINERDTQIYFELASTHEELSNQLKESRPDVGGLVIVYDGDKTD 1066
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 390 MSHYCKSGHVKGNSCSSFKLVFVKLPTTANNVARAISSFYNKFFFLSCFKTSP 232
++ YCK G ++ FK + ++ AN +AR + Y +F++L F P
Sbjct: 236 LAKYCKGGFLR----QGFKTLPLQDIVKANQIAREVIESYPEFYYLDLFYNLP 284
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 11 SLK*QFKLFTMPASTSDMEPLREKAFQDYRKKLM-EHKEVESRLKEGRDQLKDLTKQYDK 187
+LK +L + S + E A QD + +L + ++E R+ G ++K+LTK+ +
Sbjct: 537 TLKENAQLLVVLDSREERIRALEGAQQDKKAELSTDISKLEYRVNIGNSRIKELTKRNKE 596
Query: 188 SENDLKALQ 214
S +D+K ++
Sbjct: 597 SSSDIKGIK 605
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 59 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 226
++E L+EK+ R+ ++KE+E L E + L DL+K + K L+ + Q
Sbjct: 145 NVEELKEKSTLLEREVNQQNKEIERILSENKVTLADLSKTQENLMKKAKELEDLQQ 200
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 50 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 211
S S + EKA + +K + +ES ++ RD+ KD ++ +SEN+L L
Sbjct: 263 SGSKHDDAEEKARRKEKKMKKDRPSLESSSRKKRDKDKDAMRERLRSENELPHL 316
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGR-DQLKDLTKQYDKSENDLKALQSVGQIVG 235
RE+AFQD KLM H ++ S+L + + + + D QY S D +++GQ+ G
Sbjct: 653 REQAFQDLATKLMSH-QINSKLAQLKPNDIPDPKWQYWPSLFD----KNIGQVAG 702
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 77 EKAFQDYRK-KLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
EK +Q YR+ K E K + ++K ++LKD K +DLK LQ
Sbjct: 579 EKKYQQYREEKEPELKSLRDQVKNLGERLKDAEFVKKKQLDDLKKLQ 625
>SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +2
Query: 38 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
T+ + +D+E R+ + +RK++ E + +S L+ Q K+ K+ E+D+K L+
Sbjct: 367 TLQQTANDLEAQRKASEYSFRKRIHETDQAKSELEW---QQKNTMKEIATLEDDIKGLK 422
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
EK DYRK E+ ++ +++ +++DL D++E + +A++
Sbjct: 1229 EKLESDYRKLQQENVDLRAKVNALNKRIRDLEAAKDRAEKEKQAIK 1274
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 89 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
+DY+ KL EHK L+ QL+ KQY + +D K
Sbjct: 581 KDYKDKLEEHKFQVVALQTENAQLRSNVKQYKRLIDDYK 619
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 38 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLK 163
T+ + + + L+ K +++LME K + S+ K+ RD+LK
Sbjct: 73 TLSMTEKERDELKSKMNTGLKEELMEVKNLLSKTKQERDELK 114
>SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 56 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 211
SD+E K +KK E +E RL+ D L D+ +K +++ +
Sbjct: 51 SDVEEYEGKKKAARKKKAAEKRETSKRLRPVEDDLDDIFTNVEKRRKEMEEI 102
>SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37)
Length = 201
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 62 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
+E LRE R++ +H+ S LK+G +++ T Q ++ N+L+
Sbjct: 17 LEDLREVVAATEREEHAKHERRVSALKDGEKIIEERTTQLARTHNELQ 64
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
REK Q+ + ME++++ L E R QL+D+ + +EN+ + L+
Sbjct: 299 REKGLQN---QSMENRKLAQSLDELRQQLRDMKNKLSYAENEAQRLR 342
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2
Query: 122 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 232
E +++LKE D++++L +QYD+ + L++ +++
Sbjct: 2576 EAKAKLKEVTDRMEELKRQYDEKSAQKEELRAKAELL 2612
>SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3)
Length = 244
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGR----DQLKDLTKQYDKSENDLKAL 211
REK + +KKL E +++E++ G DQLK L+++ D E +L AL
Sbjct: 193 REKLGRKLKKKLCEIQQLEAKKNSGGKLDCDQLKKLSRKRD-LEEELAAL 241
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 56 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYD 184
SD+E L+E+ +D +HK++++R + +D+L +T++ D
Sbjct: 179 SDVEELQEQV-EDMAALAKKHKQLKTRNDDLQDELDQVTRKRD 220
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 318 LPTTANNVARAISSFYNKFFFLSCFKTS-PTICPTLCRAF 202
LP NV +F + FF + P ICPT CR F
Sbjct: 125 LPDILPNVLCICPTFCHTFFASARLSAERPFICPTFCRTF 164
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 89 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
Q+ KKL E RL E + ++L K+ +K N+LK
Sbjct: 331 QNVTKKLKETSSEYERLSEELGERENLLKESEKKRNELK 369
>SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 98 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
R + EH+E E+ L+ +D+L + K Y++ + DL+ ++
Sbjct: 275 RDRRREHREEETVLR--KDELDKVAKLYEEEKQDLREME 311
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 65 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 196
+P R++ F++ K+ E + + K+G +LKD KQ EN
Sbjct: 238 KPDRDEMFRENMKEYEEQAKKYVKPKKGPPKLKDRLKQQQSHEN 281
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 304 GCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVD 408
G LD NKL GT+++ + + + H P+ D
Sbjct: 429 GENEDLDSNKLNAGTKISEEQEQMIVDSHAPQTND 463
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 122 EVESRLKEGRDQLKDLTKQYDKSENDLKALQS 217
E+E +L+ ++LKD Q K +N+L LQ+
Sbjct: 907 ELEEKLRRTEEELKDRDGQVAKLDNELTKLQN 938
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 101 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
K+ ++ +E+++R R+ KQ+D+SEN + L+
Sbjct: 447 KRNLQLQELKARADAAREAATSCKKQFDESENQRRQLE 484
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 65 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 187
E +REK +D R++ ++V R + R+Q KD + DK
Sbjct: 120 EKIREKRERDRREERDRERDVRMRERFEREQEKDRERDRDK 160
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
E+ Q + KL KEVE+ E DQLK ++ DK E +++
Sbjct: 13 EETLQSFLTKL---KEVEAERAELEDQLKTEEEKIDKLEGEIE 52
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 122 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 241
E+++RL E QL+D +YD + D Q++ Q+ E+
Sbjct: 4 ELQARLAETEQQLRDALSEYDSLKRDYD--QAMAQLQEEI 41
>SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056)
Length = 416
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 29 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 196
++ M + + L+E Q +++ KE R KE RD++KD + DK+ +
Sbjct: 279 QIVVMASGDENDNKLKEDELQRSKREREREKE-RDRNKEDRDRVKDRDRDRDKARD 333
>SB_44096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/49 (24%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 89 QDYRKKLMEHKEVESRLK--EGRDQLKDLTKQYDKSENDLKALQSVGQI 229
+D K++ + + R+K EG + ++D +K+Y+K ++ + A ++ G++
Sbjct: 237 KDKEKEVSDEEPPSKRVKLEEGSETVEDYSKEYEKLKSKIPAGKTPGKM 285
>SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7)
Length = 536
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 56 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
S+ + R+K R+K E+KE + + Q + K++ +ND K
Sbjct: 345 SENKEFRDKENNAKRQKRSENKEFRDKENNAKRQKRSENKEFRDKDNDAK 394
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 75 EKRPSRITERNS-WSIRKSSHDSKKVVTN 158
E+ SRIT+RN W ++S+ SKK TN
Sbjct: 160 EESRSRITQRNRFWIFKRSAVKSKKYDTN 188
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLK--EGRDQLKDLTKQYDKSEND 199
R+K Q +KKL + K+VE+ K E +++L+D Q D ND
Sbjct: 732 RDKKKQKKKKKLTQDKDVETENKNNEEKEKLEDDADQ-DHQSND 774
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 92 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 205
D +KL++ + V R ++ D L L KQY+++EN ++
Sbjct: 406 DELEKLLQEERV--RAEKYEDALTALNKQYEETENQIR 441
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,309,524
Number of Sequences: 59808
Number of extensions: 270613
Number of successful extensions: 908
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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