Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0168.Seq
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 150 7e-37
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 150 7e-37
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 56 1e-08
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 52 2e-07
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 49 2e-06
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 32 0.27
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 32 0.27
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 32 0.27
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 30 0.84
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 30 0.84
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.1
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 1.9
U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical p... 29 1.9
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 3.4
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 4.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 4.5
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 28 4.5
DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low ... 28 4.5
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 5.9
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical pr... 27 5.9
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 5.9
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 5.9
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchang... 27 5.9
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 27 7.8
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 27 7.8
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 7.8
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 7.8
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 150 bits (363), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
L+ EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLVY
Sbjct: 70 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 129
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
MSHEDPG+++YS +GGL EQIR+LREV+
Sbjct: 130 KMSHEDPGNISYSDVGGLAEQIRELREVV 158
Score = 76.2 bits (179), Expect = 1e-14
Identities = 35/66 (53%), Positives = 49/66 (74%)
Frame = +2
Query: 44 PASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVG 223
P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+K+LQSVG
Sbjct: 4 PTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVG 63
Query: 224 QIVGEV 241
QIVGEV
Sbjct: 64 QIVGEV 69
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 150 bits (363), Expect = 7e-37
Identities = 68/89 (76%), Positives = 79/89 (88%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
L+ EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPREVDPLVY
Sbjct: 78 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
MSHEDPG+++YS +GGL EQIR+LREV+
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVV 166
Score = 78.6 bits (185), Expect = 2e-15
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +2
Query: 23 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 202
QF P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+
Sbjct: 5 QFSNMVEPTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDI 64
Query: 203 KALQSVGQIVGEV 241
K+LQSVGQIVGEV
Sbjct: 65 KSLQSVGQIVGEV 77
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 65.3 bits (152), Expect = 2e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
++K +VK +YVV + +D N L G RVAL + + + LP +VDPLV M E
Sbjct: 92 KKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVE 151
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
D TY +GGL +QI++++EVI
Sbjct: 152 KVPDSTYEMVGGLDKQIKEIKEVI 175
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 61.7 bits (143), Expect = 3e-10
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
++K +VK +Y+V +D + L GTRVAL I LP +VDPLV M E
Sbjct: 87 KKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVE 146
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
D TY +GGL QI++++EVI
Sbjct: 147 KVPDSTYEMVGGLDTQIKEIKEVI 170
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 61.7 bits (143), Expect = 3e-10
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
++K +VK +Y+V +D + L GTRVAL I LP +VDPLV M E
Sbjct: 108 KKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVE 167
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
D TY +GGL QI++++EVI
Sbjct: 168 KVPDSTYEMVGGLDTQIKEIKEVI 191
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
+ ++++ ++VV + ++ G RV +D I LP ++DP V M E
Sbjct: 110 DPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVE 169
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
+ DVTYS +GG +QI +LREV+
Sbjct: 170 EKPDVTYSDVGGCKDQIEKLREVV 193
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
LE + IV +T G Y V LD+ LK G VAL + ++ LP E D +
Sbjct: 89 LEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQ 148
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
+ ++ D++Y IGGL Q +++RE +
Sbjct: 149 MLRPDEKPDISYGDIGGLDMQKQEVREAV 177
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 238 SLETAQEEKFIVKATN-GPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPL 414
SLE +++ + +TN G + V +DK +L+ G V L+ ++ L + DP+
Sbjct: 114 SLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPM 173
Query: 415 VYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
V M E TY+ +GGL +QI++++E +
Sbjct: 174 VSVMKLEKAPQETYADVGGLDQQIQEIKEAV 204
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 360 KGNSCSSFKLVFVKLPTTANNVARAISSFYNKFFFLSCFKTSPTI 226
+G+ C S V + LP T +NV R + FY + C +++ TI
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFYAA---VPCLRSADTI 248
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 360 KGNSCSSFKLVFVKLPTTANNVARAISSFYNKFFFLSCFKTSPTI 226
+G+ C S V + LP T +NV R + FY + C +++ TI
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFYAA---VPCLRSADTI 248
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 360 KGNSCSSFKLVFVKLPTTANNVARAISSFYNKFFFLSCFKTSPTI 226
+G+ C S V + LP T +NV R + FY + C +++ TI
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFYAA---VPCLRSADTI 248
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.84
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 400 EVDPLVYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
E DP+ E D+ Y +GG+ +Q+ Q++E++
Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMV 226
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.84
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 29 KLFTMPASTSDMEPLR--EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 202
K+F TSD L EK F D + L K VE LKE RD+ K ++ ++E+
Sbjct: 195 KIFAFTKETSDTPDLTDDEKKFIDQLETLRV-KSVELSLKEERDKRKSRAEERKETESKK 253
Query: 203 KALQSV 220
+ L ++
Sbjct: 254 QLLDAL 259
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 113 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1096 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1129
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 113 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 113 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 59 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
D+E E+ Q +K L++ V+ RL+ ++L +L YDK + + L+
Sbjct: 953 DLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKRLLE 1004
>U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical
protein ZK1248.11 protein.
Length = 201
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 56 SDMEPLREKAFQD-YRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
SD P EKA ++ Y K HK V+ + +D +K + + EN+++ +Q
Sbjct: 77 SDEVP-NEKALEELYEKAKKTHKNVKGERQYFKDIIKSIRDESKNDENEMEVMQ 129
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 92 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 232
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2
Query: 71 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKA 208
L+++ ++Y K EVE +++E RD+++ + ++ DL A
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDA 335
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 80 KAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 241
KA +Y K L + +E E +K+L K + EN K LQSV ++VGE+
Sbjct: 2989 KANLEYSKILEKIAPLEG---EKNKLVKNLKKAEKQMENLSKGLQSVDEVVGEL 3039
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 98 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 220
R+K +E + +E+ RD +KDL KQ+++ ++ +K L ++
Sbjct: 781 REKSLEGR-LETHSMTKRDNMKDLKKQFEQKQDAVKELNAL 820
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 92 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 232
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2
Query: 71 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKA 208
L+++ ++Y K EVE +++E RD+++ + ++ DL A
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDA 335
>Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical
protein F11E6.6 protein.
Length = 252
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 288 AISSFYNKFFFLSCFKTSPTICPTLCRAFRSFSLLSYCL 172
AIS+ K+FF+S K P I P L A R SL C+
Sbjct: 17 AISATATKYFFVSLLKKYPHILPFL--ASRDASLFGECV 53
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 92 DYRKKLMEHKE-VESRLKEGRDQLKDLTKQYDKSENDLKALQS 217
+++ K+ E KE +E +KE DQ+ +L +Q++ + LQS
Sbjct: 998 EWKAKIEEEKEQLEQHVKELEDQVAELMEQHETHFRQAQLLQS 1040
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 152 DQLKDLTKQYDKSENDLKALQSVGQ 226
++LKDL YDK +D +AL+ +G+
Sbjct: 711 EKLKDLVNNYDKDVDDEEALKKLGK 735
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 211
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 194 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 244
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 211
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 959 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 1009
>Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.4 protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 86 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLK 205
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIK 291
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 196
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 252 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 288
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 196
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 187 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 223
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 400 EVDPLVYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
E DP+ E +V Y +GG+ +Q+ Q++E++
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMV 225
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 400 EVDPLVYNMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
E DP+ E +V Y +GG+ +Q+ Q++E++
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMV 225
>DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low
density lipoproteinreceptor associated protein (37.4 kD)
protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 86 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLK 205
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIK 291
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 98 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
+K L+E +ESRLKE Q +L +K + KAL+
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALE 1015
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 98 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
+K L+E +ESRLKE Q +L +K + KAL+
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALE 1015
>Z34799-7|CAA84320.2| 574|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 574
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 229 SWRSLETAQEEKFIVKATNGPRYVVGCRRQLDKN 330
SW+++ A + I+ NGP Y+ C R +D++
Sbjct: 428 SWKTVAAAINQSEIIP--NGPYYLFSCSRSIDED 459
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 98 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
+K L+E +ESRLKE Q +L +K + KAL+
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALE 1015
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 101 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 193
KKL++HK E L +GR+ +K L + K E
Sbjct: 107 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 138
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 101 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 193
KKL++HK E L +GR+ +K L + K E
Sbjct: 158 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 189
>AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchangers
protein 10 protein.
Length = 668
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -1
Query: 235 SNYLSNTL*GFQVIFTLVILFG-QIF*LVTTFFES*LDFLMLHEFLSVILEGLFS*RLHV 59
+ Y+S+ L GF + FT+ L G QI ++T + + FL + F S+I +F R V
Sbjct: 581 TTYISDLLIGFGLPFTIACLQGKQIDLIITPVYRLLMLFLAISLFTSLI--AIFVQRFKV 638
Query: 58 R 56
R
Sbjct: 639 R 639
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 119 KEVESRLKEGRDQLKDLTKQYDKSEN---DLKALQSVGQIVGE 238
K+ + L+E RD+ K TK+Y++ E +LK + + G + E
Sbjct: 92 KKYDEELEEKRDENKKATKEYEELEKVAANLKEIMNPGAFMTE 134
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 44 PASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKD 166
PAS + PL + +K++E K+VE+ K+ + +KD
Sbjct: 41 PASQPALSPLDLTPAKKVEEKVIEEKKVENNPKKEEEPVKD 81
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 92 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 199
D+ + K VE +K ++KDL +Q+ END
Sbjct: 213 DFEVMMKYRKTVEIEMKSVEQRIKDLKEQFVGMEND 248
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 65 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKA 208
E +EK ++ +KL+ +E +KE +++K ++ K E LKA
Sbjct: 860 EKRKEKEAEEENEKLIAERERMRAIKEEEERVKAEREKVKKEEERLKA 907
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,487,696
Number of Sequences: 27780
Number of extensions: 199010
Number of successful extensions: 800
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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