Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0168.Seq
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 136 6e-33
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 136 6e-33
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 62 2e-10
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 62 3e-10
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 62 3e-10
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 61 5e-10
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 56 1e-08
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 56 1e-08
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 47 8e-06
At1g51940.1 68414.m05855 protein kinase family protein / peptido... 30 1.0
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 29 1.4
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 4.2
At2g45560.1 68415.m05665 cytochrome P450 family protein 28 4.2
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 28 4.2
At2g33793.1 68415.m04145 expressed protein 28 4.2
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 27 5.5
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 27 5.5
At2g45550.1 68415.m05664 cytochrome P450 family protein 27 5.5
At5g57210.1 68418.m07147 microtubule-associated protein-related ... 27 7.3
At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein co... 27 7.3
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.3
At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.3
At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOA... 27 7.3
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 27 7.3
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 27 9.6
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 27 9.6
At1g67230.1 68414.m07652 expressed protein 27 9.6
At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) simil... 27 9.6
At1g13080.2 68414.m01517 cytochrome P450 family protein identica... 27 9.6
At1g13080.1 68414.m01516 cytochrome P450 family protein identica... 27 9.6
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 136 bits (330), Expect = 6e-33
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VY
Sbjct: 67 LRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
NM HEDPG+++YSA+GGL +QIR+LRE I
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIRELRESI 155
Score = 73.3 bits (172), Expect = 8e-14
Identities = 31/56 (55%), Positives = 46/56 (82%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 241
R A +YRKKL++HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEV
Sbjct: 11 RTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEV 66
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 136 bits (330), Expect = 6e-33
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VY
Sbjct: 67 LRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
NM HEDPG+++YSA+GGL +QIR+LRE I
Sbjct: 127 NMLHEDPGNISYSAVGGLGDQIRELRESI 155
Score = 73.3 bits (172), Expect = 8e-14
Identities = 32/56 (57%), Positives = 45/56 (80%)
Frame = +2
Query: 74 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 241
R A DYRKKL+ HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEV
Sbjct: 11 RTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEV 66
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
+ K +VK +YVV + +D KL TRVAL + + LP +VDPLV M E
Sbjct: 94 KNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVE 153
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
D TY IGGL +QI++++EVI
Sbjct: 154 KVPDSTYDMIGGLDQQIKEIKEVI 177
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 61.7 bits (143), Expect = 3e-10
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +1
Query: 256 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 435
+ K +VK +YVV + +D K+ TRVAL + + LP +VDPLV M E
Sbjct: 94 KNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVE 153
Query: 436 DPGDVTYSAIGGLXEQIRQLREVI 507
D TY IGGL +QI++++EVI
Sbjct: 154 KVPDSTYDMIGGLDQQIKEIKEVI 177
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +1
Query: 253 QEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 432
++ K++V +YVVG + ++ G RV +D I LP ++DP V M+
Sbjct: 137 EDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTV 196
Query: 433 EDPGDVTYSAIGGLXEQIRQLREVI 507
E+ D TYS IGG EQI ++REV+
Sbjct: 197 EEKPDATYSDIGGCKEQIEKIREVV 221
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +1
Query: 253 QEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 432
++ K+++ ++VVG ++ ++ G RV +D I LP ++DP V M+
Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
Query: 433 EDPGDVTYSAIGGLXEQIRQLREVI 507
E+ DVTY+ +GG EQI ++REV+
Sbjct: 160 EEKPDVTYNDVGGCKEQIEKMREVV 184
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +1
Query: 244 ETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYN 423
E E IV ++ GP Y VG +DK++L+ G + + L+++ L EVDP+V
Sbjct: 117 ELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSV 176
Query: 424 MSHEDPGDVTYSAIGGLXEQIRQLREVI 507
M E +Y+ IGGL QI++++E +
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKEAV 204
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +1
Query: 244 ETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYN 423
E E IV ++ GP Y VG +DK++L+ G + + L+++ L EVDP+V
Sbjct: 117 ELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSV 176
Query: 424 MSHEDPGDVTYSAIGGLXEQIRQLREVI 507
M E +Y+ IGGL QI++++E +
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKEAV 204
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 46.8 bits (106), Expect = 8e-06
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +1
Query: 241 LETAQEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 420
+E + IV +T G Y V +++ LK VAL + ++ LP E D +
Sbjct: 83 MEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSIS 142
Query: 421 NMSHEDPGDVTYSAIGGLXEQIRQLREVI 507
+S + DV+Y+ IGG Q +++RE +
Sbjct: 143 LLSQSEKPDVSYNDIGGCDIQKQEIREAV 171
>At1g51940.1 68414.m05855 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
contains protein kinases ATP-binding region signature,
PROSITE:PS00107
Length = 651
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -2
Query: 198 SFSLLSYCLVKSFSWSRPSLSRDSTSLCS--MSFFL*SWKAFSLNGSMSDVL 49
+F + L+ SFS S+P D+T LCS ++F ++FS+ SM DVL
Sbjct: 4 TFYIFFLSLLPSFSSSKPMNCSDTTRLCSSFLAFKPNQNQSFSVIQSMFDVL 55
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 50 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 196
ST E R++ F+DY L KE +R+K+ + +D+ +++DK +
Sbjct: 797 STIGDESFRKRCFEDYVSLL---KEQSNRIKQNKKVPEDVREEHDKGRD 842
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = +2
Query: 56 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 214
++++ EKA ++ ++ ++ + RLK+ + K+ K+ + +E + ALQ
Sbjct: 137 TELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQ 189
>At2g45560.1 68415.m05665 cytochrome P450 family protein
Length = 512
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 255 LSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRPS--LSRD 130
L+ F ICP + A ++ SL+ L+ SF W P LS D
Sbjct: 440 LTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSED 483
>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
protein similar to HMG protein [Arabidopsis thaliana]
GI:2832361; contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 151
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 158 LKDLTKQYDKSENDLKALQSVGQIVGE 238
L D KQY + D+K+++ +G+ GE
Sbjct: 74 LDDFRKQYQEENPDVKSMREIGKTCGE 100
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 SDMEPLREKAFQDYRKKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKAL 211
S ++ REKA +D RKK E V + +K D+LK +K + +N KAL
Sbjct: 45 SALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELK--SKLEKERQNFSKAL 95
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 122 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 220
++++R+ E DQL DLT + ++E D + Q+V
Sbjct: 478 KLKTRIAELEDQLSDLTAERYENERDSRLTQAV 510
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 27.5 bits (58), Expect = 5.5
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 29 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQ-LKDLTKQYDK--SEND 199
KL T+P S SD+ P + R+KL + +E++ KE + LK+L ++ S ++
Sbjct: 383 KLRTVPLSESDIFPSSFHKTPEGRRKLTK-EELQKFTKESTENALKELVSSPEEGSSGSE 441
Query: 200 LKALQSVGQIVGE 238
+A + + VGE
Sbjct: 442 KQAARGTSEPVGE 454
>At2g45550.1 68415.m05664 cytochrome P450 family protein
Length = 511
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 255 LSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRPS 142
L+ F ICP L A ++ SL+ L+ SF W P+
Sbjct: 440 LTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPN 477
>At5g57210.1 68418.m07147 microtubule-associated protein-related
contains some similarity to microtubule-associated
protein GI:5032258 from [Arabidopsis thaliana]; contains
Pfam profile PF00566: TBC domain
Length = 737
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 208 PTKCWTNSWRSLETAQEEKFIVKATNGPR 294
P W WR L +A+EE+ KA P+
Sbjct: 492 PESYWEEKWRVLNSAEEEERRKKALQRPK 520
>At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit
Length = 573
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 32 LFTMPASTSDMEPLREKAFQDYRKKLMEH 118
LFT+ ++S L++ + Q + + LMEH
Sbjct: 3 LFTLSTTSSSSSKLKQHSHQSFSESLMEH 31
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +2
Query: 29 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 187
+LFT P S SD EP+ F D+ E +E + L+ DQ+K T +
Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222
Query: 188 SENDLKALQS 217
N L+S
Sbjct: 223 LVNSFYELES 232
>At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 312
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +2
Query: 29 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 187
+LFT P S SD EP+ F D+ E +E + L+ DQ+K T +
Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222
Query: 188 SENDLKALQS 217
N L+S
Sbjct: 223 LVNSFYELES 232
>At1g63050.1 68414.m07122 membrane bound O-acyl transferase (MBOAT)
family protein low similarity to porcupine from [Xenopus
laevis] GI:6714514, GI:6714520, GI:6714518, GI:6714516;
contains Pfam profile PF03062: MBOAT family
Length = 465
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 284 LVAFTINFSS*AVSRLLQLFVQHFVGLSGHFHSCHIVW 171
LV TI ++S A+ R L F+ F+G + + CH+ +
Sbjct: 70 LVPMTIGYASMAIYRPLSGFITFFLGFA-YLIGCHVFY 106
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVES--RLKEGRDQLKDLTKQ--YDKSEND 199
E Q Y+K L EH+ E+ RL E K+L +Q YD + D
Sbjct: 339 EPVIQTYQKALTEHRNPETLKRLNEAERAKKELEQQEYYDPNIGD 383
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +2
Query: 110 MEHKEVESRLKEGRDQLKD-------LTKQYDKSENDLKALQSV 220
M+ + VE +K + QL D K+YD+S ND K L+ +
Sbjct: 495 MKFRSVEDAMKHLKQQLDDSERYKLEYQKRYDESNNDKKKLEDI 538
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 32 LFTMPASTSDMEPLREKAFQDYRKKLMEHKE-VESRLKEGRDQLKDLTKQYDKSEN 196
++ P+S S+ E AF + ++E E + R++EG++++ D +QY N
Sbjct: 648 MYFHPSSKSEDTGRFEDAFDVAVEGVLERVEGLRKRIEEGKEEIFDFPEQYSWKYN 703
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +2
Query: 77 EKAFQDYRKKLMEHKEVESRLK--------EGRDQLKDLTKQYDK 187
EKA + +KKL+E KE+ LK E + QL ++ K+ D+
Sbjct: 431 EKALETEKKKLLEDKEIILNLKALVEKVSGENQAQLSEINKEKDE 475
>At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230,
acyl-activating enzyme 11 [Arabidopsis thaliana]
GI:29893231
Length = 572
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 86 FQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV---GQIVGEV 241
+QD KL EH+++E + ++G +++LT D + K L+SV G+ +GE+
Sbjct: 345 WQDEWNKLPEHQQIELQQRQG---VRNLTLA-DVDVKNTKTLESVPRDGKTMGEI 395
>At1g13080.2 68414.m01517 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 384
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 294 ARAISSFYNKFFFLSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRP 145
A + F + F L F + ICP + A S L L+ F WS P
Sbjct: 303 ANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMP 352
>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 502
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 294 ARAISSFYNKFFFLSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRP 145
A + F + F L F + ICP + A S L L+ F WS P
Sbjct: 421 ANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMP 470
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,908,720
Number of Sequences: 28952
Number of extensions: 185725
Number of successful extensions: 620
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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