Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0167.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   1.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   1.2  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   1.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    25   1.6  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   5.0  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 44  RLTNNSVRRVIDYERNDTKKRSNARKWKKNSINIS 148
           R+  ++V R   Y R+DT ++    K K  S+ IS
Sbjct: 384 RIDTSAVDRTTYYRRSDTNRQRLIHKAKMKSLRIS 418


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 44  RLTNNSVRRVIDYERNDTKKRSNARKWKKNSINIS 148
           R+  ++V R   Y R+DT ++    K K  S+ IS
Sbjct: 385 RIDTSAVDRTTYYRRSDTNRQRLIHKAKMKSLRIS 419


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 92  DTKKRSNARKWKKNSINISRTLNRLRDDIIYRVTN 196
           +T+K  +A+   + SI+I++ L    DD +YR  N
Sbjct: 102 ETEKDRDAQAIYQKSIDINKELEGKEDDKVYRGLN 136


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 92  DTKKRSNARKWKKNSINISRTLNRLRDDIIYRVTN 196
           +T+K  +A+   + SI+I++ L    DD +YR  N
Sbjct: 102 ETEKDRDAQAIYQKSIDINKELEGKEDDKVYRGLN 136


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 143 ISRTLNRLRDDIIYRVTN 196
           I R LNR+ DD++  +T+
Sbjct: 292 ILRDLNRIEDDVVLSITD 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,959
Number of Sequences: 2352
Number of extensions: 8517
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)