Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0167.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011060-1|AAR31131.1| 1045|Drosophila melanogaster LD30165p pro...    28   9.6  
AY545463-1|AAS55738.1| 1045|Drosophila melanogaster GST-containi...    28   9.6  
AE014297-569|AAF54054.3| 1045|Drosophila melanogaster CG33546-PB...    28   9.6  

>BT011060-1|AAR31131.1| 1045|Drosophila melanogaster LD30165p
           protein.
          Length = 1045

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 543 LCPHRHNTFPSTPRN*ALTPDIKNXRNKSEAAPTA 439
           L PH H  + STP      P I N R + + A  A
Sbjct: 548 LDPHSHTAYSSTPLPKVRQPQITNIRRRRDVAEPA 582


>AY545463-1|AAS55738.1| 1045|Drosophila melanogaster GST-containing
           FLYWCH zinc-fingerprotein protein.
          Length = 1045

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 543 LCPHRHNTFPSTPRN*ALTPDIKNXRNKSEAAPTA 439
           L PH H  + STP      P I N R + + A  A
Sbjct: 548 LDPHSHTAYSSTPLPKVRQPQITNIRRRRDVAEPA 582


>AE014297-569|AAF54054.3| 1045|Drosophila melanogaster CG33546-PB,
           isoform B protein.
          Length = 1045

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 543 LCPHRHNTFPSTPRN*ALTPDIKNXRNKSEAAPTA 439
           L PH H  + STP      P I N R + + A  A
Sbjct: 548 LDPHSHTAYSSTPLPKVRQPQITNIRRRRDVAEPA 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,553,241
Number of Sequences: 53049
Number of extensions: 354299
Number of successful extensions: 765
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)