Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0160.Seq
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   5.1  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    20   9.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    20   9.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   9.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   9.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   9.0  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 4/11 (36%), Positives = 7/11 (63%)
 Frame = -2

Query: 149 HHICRSSDQWW 117
           HH+ ++   WW
Sbjct: 88  HHLIKNKPNWW 98


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 4/11 (36%), Positives = 6/11 (54%)
 Frame = -2

Query: 149 HHICRSSDQWW 117
           HH+  +   WW
Sbjct: 88  HHLIENKPNWW 98


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 4/11 (36%), Positives = 6/11 (54%)
 Frame = -2

Query: 149 HHICRSSDQWW 117
           HH+  +   WW
Sbjct: 88  HHLIENKPNWW 98


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 194 EMGKGSFKYAW 226
           E GK  FK+AW
Sbjct: 41  ENGKKVFKFAW 51


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 194 EMGKGSFKYAW 226
           E GK  FK+AW
Sbjct: 41  ENGKKVFKFAW 51


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 240 SLSNTQAYLKDPLPISWASFSNFS 169
           SLS   A     L +SW S S+ S
Sbjct: 362 SLSLASAQTLSELDLSWNSISSLS 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,712
Number of Sequences: 336
Number of extensions: 1460
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)