Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0160.Seq
(363 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 143 5e-37
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 143 5e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 76 1e-16
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 66 9e-14
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.21
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.48
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 0.84
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 4.5
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 4.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 4.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 143 bits (347), Expect = 5e-37
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 233 DKLKAER 253
DKLKAER
Sbjct: 61 DKLKAER 67
Score = 75.8 bits (178), Expect = 1e-16
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +1
Query: 157 QTYHREVREGGPGNG*RILQICLGIGQTKG*AWRGITIDIAXWKXETSKYYVTIIDAPGH 336
+ + +E +E G G+ + + + K RGITIDIA WK ET+KYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGH 95
Query: 337 RDFIKNMIT 363
RDFIKNMIT
Sbjct: 96 RDFIKNMIT 104
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 143 bits (347), Expect = 5e-37
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +2
Query: 53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 232
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 233 DKLKAER 253
DKLKAER
Sbjct: 61 DKLKAER 67
Score = 77.0 bits (181), Expect = 6e-17
Identities = 39/69 (56%), Positives = 47/69 (68%)
Frame = +1
Query: 157 QTYHREVREGGPGNG*RILQICLGIGQTKG*AWRGITIDIAXWKXETSKYYVTIIDAPGH 336
+ + +E +E G G+ + + + K RGITIDIA WK ETSKYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 95
Query: 337 RDFIKNMIT 363
RDFIKNMIT
Sbjct: 96 RDFIKNMIT 104
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 76.2 bits (179), Expect = 1e-16
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 256 RGITIDIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
RGITIDIA WK ETSKYYVTIIDAPGHRDFIKNMIT
Sbjct: 12 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 47
Score = 25.4 bits (53), Expect = 0.21
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 224 WVLDKLKAER 253
WVLDKLKAER
Sbjct: 1 WVLDKLKAER 10
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 66.5 bits (155), Expect = 9e-14
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +1
Query: 271 DIAXWKXETSKYYVTIIDAPGHRDFIKNMIT 363
DIA WK ETSKYYVTIIDAPGHRDFIKNMIT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMIT 31
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.21
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 65 KTHINIVVIGHVDSGKST 118
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 310 VTIIDAPGHRDFI 348
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.48
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 74 INIVVIGHVDSGKST 118
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.4 bits (48), Expect = 0.84
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 66 FSLPIFG*SRIXNCV*Y 16
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 155 DKRTIEKFEKEAQEMG 202
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 155 DKRTIEKFEKEAQEMG 202
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 155 DKRTIEKFEKEAQEMG 202
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,547
Number of Sequences: 438
Number of extensions: 1599
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8556345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -