Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0159.Seq
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.98 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   3.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.9  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   5.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.2  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   6.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 154 DHISEDTYQAMMEWGKSVGKTCITCKD 234
           D +SEDT+  +  WG S  K  I   D
Sbjct: 121 DDLSEDTFYDIRLWGVSFSKKQILRSD 147



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +1

Query: 115 PVPVMRLLEVIKSDHISEDTYQAMMEWGKSVGKTC 219
           P PV  +   +++  + E+TY A+++W  +   +C
Sbjct: 160 PTPVTHIF--LQNLILKENTYDAVIKWSPNEDYSC 192


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -2

Query: 216 SLAHRLAPLHHGLVSVLGNVIAFYNLQESHHW 121
           SL  +L   HH L+   G    + +++  ++W
Sbjct: 127 SLVIKLVDYHHQLLGHFGATKVYNSMKREYYW 158


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 133 LLEVIKSDHISEDTYQAMMEWG 198
           L E++KSD + ++ +  +ME G
Sbjct: 33  LEEILKSDRLLKNYFNCLMERG 54


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 144 YKKRSHFRGHLPGHDG 191
           Y K SH + HL  H G
Sbjct: 326 YGKTSHLKAHLRWHTG 341


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 139 EVIKSDHISEDTYQAMMEWGK 201
           E+IKSD + ++    ++E GK
Sbjct: 35  EIIKSDRLLKNYVNCLLEKGK 55


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 175 YQAMMEWGKSVGKTCITC 228
           Y  ++EW  ++ K C  C
Sbjct: 59  YTFLLEWYHTLSKACYDC 76


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +1

Query: 139 EVIKSDHISEDTYQAMMEWGKSVGKTCITCKDTP 240
           E++K+D ++++    ++E GK   +     KD P
Sbjct: 31  EILKNDRLTKNYLDCILEKGKCTPEGEELKKDIP 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,799
Number of Sequences: 336
Number of extensions: 2753
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)