Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0158.Seq
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 142 4e-34
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 142 4e-34
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 142 4e-34
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 142 4e-34
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 142 4e-34
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 142 4e-34
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 142 4e-34
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 141 9e-34
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 108 8e-24
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 8e-04
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein. 30 4.4
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein. 30 4.4
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s... 30 4.4
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p... 30 4.4
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ... 30 4.4
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPR DV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRSDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 142 bits (345), Expect = 4e-34
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 141 bits (342), Expect = 9e-34
Identities = 66/71 (92%), Positives = 71/71 (100%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFG 100
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 101 FIVLTTSAGIMDHEEARRKH 120
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 108 bits (260), Expect = 8e-24
Identities = 55/71 (77%), Positives = 60/71 (84%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 60 IVVNLTGRLNK 70
Score = 48.0 bits (109), Expect = 2e-05
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFG 337
GVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 72 GVISPRFDVQLKDLEKWQNNLLPSRQFG 99
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 337 FLVLTTSGGIMDHEEARXKH 396
F+VLTTS GIMDHEEAR KH
Sbjct: 100 FIVLTTSAGIMDHEEARRKH 119
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 42.3 bits (95), Expect = 8e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 152
MV MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
Length = 1704
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPHDSLV 338
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH + +
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPHANKL 1511
Query: 339 PSPYN 353
Y+
Sbjct: 1512 VRTYS 1516
>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
Length = 1704
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPHDSLV 338
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH + +
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPHANKL 1511
Query: 339 PSPYN 353
Y+
Sbjct: 1512 VRTYS 1516
>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), member 3 protein.
Length = 1704
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPHDSLV 338
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH + +
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPHANKL 1511
Query: 339 PSPYN 353
Y+
Sbjct: 1512 VRTYS 1516
>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
protein.
Length = 1708
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPHDSLV 338
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH + +
Sbjct: 1458 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPHANKL 1515
Query: 339 PSPYN 353
Y+
Sbjct: 1516 VRTYS 1520
>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
specific ATP-binding cassette protein protein.
Length = 1704
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 159 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPHDSLV 338
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH + +
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPHANKL 1511
Query: 339 PSPYN 353
Y+
Sbjct: 1512 VRTYS 1516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,136,877
Number of Sequences: 237096
Number of extensions: 946394
Number of successful extensions: 1514
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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