Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0157.Seq
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1271|AAF50552.1|  275|Drosophila melanogaster CG8541-PA...    30   0.70 
U17223-1|AAC46913.2|  609|Drosophila melanogaster Wee1 kinase pr...    27   4.9  
AY118942-1|AAM50802.1|  609|Drosophila melanogaster LD27552p pro...    27   4.9  
AE014134-1187|AAF52453.2|  609|Drosophila melanogaster CG4488-PA...    27   4.9  
AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p pro...    27   6.5  
AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-P...    27   6.5  
AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA ...    27   6.5  
BT016021-1|AAV36906.1|  662|Drosophila melanogaster RE15373p pro...    27   8.6  
AE014298-2002|AAN09579.1|  662|Drosophila melanogaster CG11584-P...    27   8.6  

>AE014296-1271|AAF50552.1|  275|Drosophila melanogaster CG8541-PA
           protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 23  HPPAVPVTLIQTQTAPDPVHRAVAALMDT-VPTVMMEMYHLPAVPVTLIRIQTA*DPGNP 199
           + PA PV      +AP PV+ A A +     P V   +Y  PA PV    + +A  P   
Sbjct: 147 YAPAAPVVAKTVYSAPAPVYAAPAPVYAAPAPVVAKTVYSAPA-PVLAKTVYSAPAPVYA 205

Query: 200 AVA-ALMKTV 226
           A A A+ KTV
Sbjct: 206 ASAPAVAKTV 215


>U17223-1|AAC46913.2|  609|Drosophila melanogaster Wee1 kinase
           protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 250 STPTVPVTLIQTQTAQDPEHPAAAA 324
           STP  P T++Q  T Q   H +AAA
Sbjct: 100 STPATPKTILQKSTTQCSNHLSAAA 124


>AY118942-1|AAM50802.1|  609|Drosophila melanogaster LD27552p
           protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 250 STPTVPVTLIQTQTAQDPEHPAAAA 324
           STP  P T++Q  T Q   H +AAA
Sbjct: 100 STPATPKTILQKSTTQCSNHLSAAA 124


>AE014134-1187|AAF52453.2|  609|Drosophila melanogaster CG4488-PA
           protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 250 STPTVPVTLIQTQTAQDPEHPAAAA 324
           STP  P T++Q  T Q   H +AAA
Sbjct: 100 STPATPKTILQKSTTQCSNHLSAAA 124


>AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p
           protein.
          Length = 663

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 61  LSLNQCYWNCRWMIHFHH 8
           +S++   W+C+WM++F H
Sbjct: 394 ISIDDNPWSCQWMLNFSH 411


>AE014298-1830|AAN09644.1|  582|Drosophila melanogaster CG32644-PB
           protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = +2

Query: 2   TVVMEVYHPPAVPVTLIQTQTAPDPVHRAVAALMDTVPTVMMEMYHLPAVPVTLIRIQTA 181
           T    V   P+   T+  T T  DP     +    TVPT + E      V  TLI   T 
Sbjct: 474 TTTTTVTTEPSTTTTVSSTTTTKDPTTTESSTTTTTVPTTLAES---STVTTTLISKTTT 530

Query: 182 *DP 190
            +P
Sbjct: 531 SEP 533


>AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA
           protein.
          Length = 663

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 61  LSLNQCYWNCRWMIHFHH 8
           +S++   W+C+WM++F H
Sbjct: 394 ISIDDNPWSCQWMLNFSH 411


>BT016021-1|AAV36906.1|  662|Drosophila melanogaster RE15373p
           protein.
          Length = 662

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 20  YHPPAVPVTLIQTQTAPDPVHRAVAA 97
           Y PP V   +  TQ AP P+  A AA
Sbjct: 615 YSPPVVQQQVTYTQPAPAPIQVAAAA 640


>AE014298-2002|AAN09579.1|  662|Drosophila melanogaster CG11584-PB
           protein.
          Length = 662

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 20  YHPPAVPVTLIQTQTAPDPVHRAVAA 97
           Y PP V   +  TQ AP P+  A AA
Sbjct: 615 YSPPVVQQQVTYTQPAPAPIQVAAAA 640


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.310    0.121    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,497,628
Number of Sequences: 53049
Number of extensions: 235089
Number of successful extensions: 616
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)