Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0156.Seq
(399 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 92 3e-18
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 87 1e-16
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 77 1e-13
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 59 3e-08
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 51 7e-06
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 50 2e-05
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 47 1e-04
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 46 4e-04
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 46 4e-04
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 44 8e-04
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 42 0.003
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 41 0.010
UniRef50_A7CR64 Cluster: Putative uncharacterized protein precur... 35 0.67
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 33 2.1
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 33 2.7
UniRef50_Q9A6V9 Cluster: Putative uncharacterized protein; n=1; ... 32 3.6
UniRef50_A4Z380 Cluster: Putative uncharacterized protein; n=1; ... 32 3.6
UniRef50_Q2CHR0 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_Q56BQ5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_Q85B60 Cluster: Protein ycf2; n=1; Adiantum capillus-ve... 32 4.8
UniRef50_UPI000069E795 Cluster: UPI000069E795 related cluster; n... 31 6.3
UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4... 31 6.3
UniRef50_Q9P9Z9 Cluster: Type I restriction-modification system ... 31 8.3
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 92.3 bits (219), Expect = 3e-18
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = -1
Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91
Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
Score = 54.8 bits (126), Expect = 6e-07
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264
YWV +DS+YK+FEVIL+DP HKAIRR+P
Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 87.0 bits (206), Expect = 1e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -1
Query: 252 IVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91
I VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 151 ICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 62.1 bits (144), Expect = 4e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 255
YW+AQD+SYKYFEVIL+D H AIRRDPKIN
Sbjct: 119 YWIAQDASYKYFEVILIDTHHSAIRRDPKIN 149
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 77.4 bits (182), Expect = 1e-13
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = -1
Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91
Q I VHKHRE RGLTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 149 QWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
Score = 54.8 bits (126), Expect = 6e-07
Identities = 20/28 (71%), Positives = 27/28 (96%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264
YWVA+DS+YK++EV+L+DP HKAIRR+P
Sbjct: 119 YWVAEDSTYKFYEVVLIDPFHKAIRRNP 146
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 59.3 bits (137), Expect = 3e-08
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = -1
Query: 291 VTQGHSSRS*DQRI---VNAVHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWL 124
V HS+ D RI VHKH E+ GLTSAG RGL GKGH + + + S RA W
Sbjct: 368 VDVAHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATWK 427
Query: 123 RRNTLQLRRKR 91
R T+ LRR R
Sbjct: 428 RNQTVSLRRYR 438
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 51.2 bits (117), Expect = 7e-06
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264
YWV +D+ YK+FEV+++DPSH AIR DP
Sbjct: 117 YWVGEDAMYKWFEVVMIDPSHPAIRNDP 144
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 50.0 bits (114), Expect = 2e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKI 258
YWV +D YK+FEVI+VDP H I+ DPKI
Sbjct: 117 YWVGEDGMYKWFEVIMVDPHHPVIKSDPKI 146
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -1
Query: 237 HKHREMRGLTSAGRSSRGL---GKG 172
HK R RGLTSAG+ RGL GKG
Sbjct: 154 HKGRVFRGLTSAGKKGRGLRNKGKG 178
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 47.2 bits (107), Expect = 1e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKI 258
YWVA+D Y+++EVILVDP H AI DP++
Sbjct: 139 YWVAEDGEYEWYEVILVDPHHPAICSDPEL 168
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 45.6 bits (103), Expect = 4e-04
Identities = 17/29 (58%), Positives = 25/29 (86%)
Frame = -2
Query: 341 VAQDSSYKYFEVILVDPSHKAIRRDPKIN 255
+ +DS+YKY+E+ILVD +H AI+ DP+IN
Sbjct: 34 INEDSTYKYYEIILVDVAHSAIQNDPRIN 62
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 45.6 bits (103), Expect = 4e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKI 258
Y+VA+D YKY+EVI+VD SH IR DP++
Sbjct: 117 YYVAEDGMYKYYEVIMVDYSHPVIRSDPEL 146
Score = 33.1 bits (72), Expect = 2.1
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -1
Query: 246 NAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRK 94
++V++ R RGLTSAG+ SRGL K KG +R ++ QL+R+
Sbjct: 151 DSVNRKRVFRGLTSAGQKSRGLTKSR---GLKGTVQRKWKKKQKERQLKRR 198
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 44.4 bits (100), Expect = 8e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 255
YWV +D S K+FE IL+DP H AI+ D +N
Sbjct: 119 YWVGEDGSQKWFEAILLDPEHGAIQNDDDLN 149
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = -1
Query: 237 HKHREMRGLTSAGRSSRGL---GKG 172
HK+R RG TSAGR +RGL GKG
Sbjct: 156 HKNRVFRGKTSAGRRARGLQNRGKG 180
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 42.3 bits (95), Expect = 0.003
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKING 252
YWVA D Y+YFEVIL+D + I+ DP +G
Sbjct: 119 YWVADDGIYRYFEVILIDCNLPTIKNDPLYSG 150
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 40.7 bits (91), Expect = 0.010
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKI 258
Y+V +D +Y +FEVIL DPSH + +DP++
Sbjct: 114 YFVYKDGAYYWFEVILADPSHPRVAKDPEL 143
>UniRef50_A7CR64 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 118
Score = 34.7 bits (76), Expect = 0.67
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 115 VASEPSCPA*ASLCLRVSMSLAETSGAATSRSQTTHLAMLMYSIHDP 255
+A+ + PA AS R+S S ATS + TTH+A M S H P
Sbjct: 30 IAAIAASPAPASPAARISASTDTVRSPATSNAVTTHVAYKMESTHTP 76
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 33.1 bits (72), Expect = 2.1
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 139
++++R + +S GR SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 32.7 bits (71), Expect = 2.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKI 258
Y++ +D + +FEVIL DP H + +D ++
Sbjct: 153 YFIYKDGKHYWFEVILADPDHPRVAQDKEL 182
>UniRef50_Q9A6V9 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 450
Score = 32.3 bits (70), Expect = 3.6
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 157 LRVSMSLAETSGAATSRSQTTHLAMLMYSIHDPLILGSRRMALCDGSTR 303
L V++SL E+ A S+ +L +L ++ D SRR A G+TR
Sbjct: 192 LAVTVSLGESGARAAGGSRGANLVLLRSALEDARAFASRRAAFEQGATR 240
>UniRef50_A4Z380 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 207
Score = 32.3 bits (70), Expect = 3.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 161 LKQREAHAGQLGSDATLFNYVANDKHLSKTVSDFPFAYFCMQMESQWVNK 12
L Q AHAG +GS L V + T++ + FCM+ + N+
Sbjct: 19 LNQSPAHAGLIGSPLALRGIVEKIRFSEPTLAPMAYTMFCMRYSDECANR 68
>UniRef50_Q2CHR0 Cluster: Putative uncharacterized protein; n=1;
Oceanicola granulosus HTCC2516|Rep: Putative
uncharacterized protein - Oceanicola granulosus HTCC2516
Length = 246
Score = 31.9 bits (69), Expect = 4.8
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 126 AKLPGVSLPLFESIYVPCRDLGSCDQPKSDHASRDAYVQHSRSVDLRIATNGLV 287
A L G + P +Y+P R+ D+PKS ++R AY++ R LR+ +G V
Sbjct: 189 ANLHGYTTP---DLYLPLRE----DEPKSKISARPAYLRSERQTVLRLPASGAV 235
>UniRef50_Q56BQ5 Cluster: Putative uncharacterized protein; n=1;
Enterobacteria phage RB43|Rep: Putative uncharacterized
protein - Enterobacteria phage RB43
Length = 85
Score = 31.9 bits (69), Expect = 4.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 156 FESIYVPCRDLGSCDQPKSDHASRDAYVQHSRSVD 260
+ + YVP RDL S +Q + A + Y QH R D
Sbjct: 5 YRNKYVPIRDLSSLEQIEETKAYSEYYAQHGRDPD 39
>UniRef50_Q85B60 Cluster: Protein ycf2; n=1; Adiantum
capillus-veneris|Rep: Protein ycf2 - Adiantum
capillus-veneris (Maidenhair fern)
Length = 2104
Score = 31.9 bits (69), Expect = 4.8
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -1
Query: 306 YPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAW 127
+PR + +G S RS + K + G+TS RSS+ L +G S T +++
Sbjct: 1736 FPRPEICRGESRRSNSFPPPLPIGKPKYCSGVTSLSRSSKSLKRGRISSLTDFEMQQSPE 1795
Query: 126 LRRNTLQLRRK 94
LR + ++ R+
Sbjct: 1796 LRNSAAEISRE 1806
>UniRef50_UPI000069E795 Cluster: UPI000069E795 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069E795 UniRef100 entry -
Xenopus tropicalis
Length = 232
Score = 31.5 bits (68), Expect = 6.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 228 REMRGLTSAGRSSRGLGKGHRYSQTKGGSRR 136
RE G+ ++GR S G G HR S G S R
Sbjct: 131 RESSGIGNSGRESSGTGNSHRESSGTGNSHR 161
>UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4;
n=41; Coelomata|Rep: Splicing factor,
arginine/serine-rich 4 - Homo sapiens (Human)
Length = 494
Score = 31.5 bits (68), Expect = 6.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -1
Query: 309 GYPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRS-SRGLGKGHRYSQTKGGSRRA 133
G P+ H S+S + E RG S GRS + L + S++KGGSR
Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343
Query: 132 AWLRRNTLQLRRKR 91
+ R + R+ R
Sbjct: 344 SRSRSKSKDKRKGR 357
>UniRef50_Q9P9Z9 Cluster: Type I restriction-modification system
endonuclease; n=17; cellular organisms|Rep: Type I
restriction-modification system endonuclease - Xylella
fastidiosa
Length = 1025
Score = 31.1 bits (67), Expect = 8.3
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -1
Query: 291 VTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRSSRGLGKGH--RYSQTKGGSRRAAWLRR 118
V G R ++I H+ R +R L S G+G+ + ++S G S AWL
Sbjct: 281 VLPGGKKRKTRKQIFPRFHQLRTVRALLRRAHSD-GVGRRYLIQHSAGSGKSNTIAWLAH 339
Query: 117 NTLQLRRK 94
++LRRK
Sbjct: 340 QLVELRRK 347
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,779,875
Number of Sequences: 1657284
Number of extensions: 6397523
Number of successful extensions: 18080
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18076
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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