BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0156.Seq (399 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 92 5e-19 AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 92 5e-19 AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 92 5e-19 AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 92 5e-19 BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 90 2e-18 L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 81 1e-15 AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 33 0.35 BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 31 1.1 BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 31 1.1 AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 31 1.1 AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 31 1.1 Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 29 7.5 D13705-1|BAA02864.1| 521|Homo sapiens fatty acid omega-hydroxyl... 29 7.5 BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 29 7.5 BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 29 7.5 BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 29 7.5 AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 29 7.5 AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 29 7.5 >BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2510008H07 gene protein. Length = 219 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 164 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 219 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 134 YWVGEDSTYKFFEVILIDPFHKAIRRNP 161 >AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 pseudogene 3 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens clone TCBAP0781 mRNA sequence. ). Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 92.3 bits (219), Expect = 5e-19 Identities = 43/56 (76%), Positives = 45/56 (80%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 52.8 bits (121), Expect = 4e-07 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKAFEVILIDPFHKAIRRNP 146 >BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 protein. Length = 204 Score = 90.2 bits (214), Expect = 2e-18 Identities = 43/56 (76%), Positives = 44/56 (78%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91 Q I VHKHREMRGLTSAGR SRGLGKGH+ T GGSRRAAW RRNTLQL R R Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKSHHTIGGSRRAAWRRRNTLQLHRYR 204 Score = 54.8 bits (126), Expect = 1e-07 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK+FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKFFEVILIDPFHKAIRRNP 146 >L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 protein. Length = 205 Score = 81.0 bits (191), Expect = 1e-15 Identities = 37/49 (75%), Positives = 39/49 (79%) Frame = -1 Query: 258 QRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 112 Q I HKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNT Sbjct: 149 QWITKPDHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197 Score = 52.8 bits (121), Expect = 4e-07 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -2 Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDP 264 YWV +DS+YK FEVIL+DP HKAIRR+P Sbjct: 119 YWVGEDSTYKAFEVILIDPFHKAIRRNP 146 >AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. Length = 1315 Score = 33.1 bits (72), Expect = 0.35 Identities = 14/34 (41%), Positives = 24/34 (70%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 139 ++++R + +S GR SRG G+G+R ++GGSR Sbjct: 236 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 269 Score = 28.7 bits (61), Expect = 7.5 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 219 RGLTSA-GRSSRGLGKGHRYSQTKGGSR 139 RGL+ GR SRG GKG + +GGSR Sbjct: 334 RGLSRGRGRGSRGRGKGMGRGRGRGGSR 361 >BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, arginine/serine-rich 4 protein. Length = 494 Score = 31.5 bits (68), Expect = 1.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -1 Query: 309 GYPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRS-SRGLGKGHRYSQTKGGSRRA 133 G P+ H S+S + E RG S GRS + L + S++KGGSR Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343 Query: 132 AWLRRNTLQLRRKR 91 + R + R+ R Sbjct: 344 SRSRSKSKDKRKGR 357 >BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, arginine/serine-rich 4 protein. Length = 494 Score = 31.5 bits (68), Expect = 1.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -1 Query: 309 GYPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRS-SRGLGKGHRYSQTKGGSRRA 133 G P+ H S+S + E RG S GRS + L + S++KGGSR Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343 Query: 132 AWLRRNTLQLRRKR 91 + R + R+ R Sbjct: 344 SRSRSKSKDKRKGR 357 >AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, arginine/serine-rich 4 protein. Length = 494 Score = 31.5 bits (68), Expect = 1.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -1 Query: 309 GYPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRS-SRGLGKGHRYSQTKGGSRRA 133 G P+ H S+S + E RG S GRS + L + S++KGGSR Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343 Query: 132 AWLRRNTLQLRRKR 91 + R + R+ R Sbjct: 344 SRSRSKSKDKRKGR 357 >AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, arginine/serine-rich 4 protein. Length = 494 Score = 31.5 bits (68), Expect = 1.1 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -1 Query: 309 GYPRGPVTQGHSSRS*DQRIVNAVHKHREMRGLTSAGRS-SRGLGKGHRYSQTKGGSRRA 133 G P+ H S+S + E RG S GRS + L + S++KGGSR Sbjct: 284 GKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSR 343 Query: 132 AWLRRNTLQLRRKR 91 + R + R+ R Sbjct: 344 SRSRSKSKDKRKGR 357 >Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. Length = 602 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 133 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 162 >D13705-1|BAA02864.1| 521|Homo sapiens fatty acid omega-hydroxylase protein. Length = 521 Score = 28.7 bits (61), Expect = 7.5 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = -1 Query: 255 RIVNAVHKHREMRGLTSAGR-SSRGLGKGHRYSQTKGGSRRAAWLRR--NTLQLRRKR 91 R+ NA H++ + LTSAGR + R H++++ K R A L++ +++RKR Sbjct: 231 RVRNAFHQNDTIYSLTSAGRWTHRACQLSHQHTRPKVIQLRKAQLQKEGELEKIKRKR 288 >BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A protein. Length = 594 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 127 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 156 >BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 594 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 127 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 156 >BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IMAGE:4448930) protein. Length = 447 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 123 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 152 >AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 281 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 127 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 156 >AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 594 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 240 VHKHREMRGLTSAGRSSRGLGKGHRYSQTK 151 +H H ++GLT LG GH YS+ K Sbjct: 127 LHFHNLVKGLTDLSACKAQLGLGHSYSRAK 156 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 54,982,778 Number of Sequences: 237096 Number of extensions: 975058 Number of successful extensions: 2084 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1973 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2084 length of database: 76,859,062 effective HSP length: 82 effective length of database: 57,417,190 effective search space used: 2870859500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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