Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0156.Seq
(399 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p pro... 87 8e-18
AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L1... 87 8e-18
M23222-1|AAA28541.1| 1110|Drosophila melanogaster fsh protein. 27 7.0
M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein. 27 7.0
BT015270-1|AAT94499.1| 1110|Drosophila melanogaster LD26482p pro... 27 7.0
AE014298-1111|AAS65279.1| 1110|Drosophila melanogaster CG2252-PE... 27 7.0
AE014298-1110|AAS65278.1| 1110|Drosophila melanogaster CG2252-PD... 27 7.0
AE014298-1109|AAS65277.1| 1110|Drosophila melanogaster CG2252-PC... 27 7.0
AE014298-1108|AAN09226.1| 1110|Drosophila melanogaster CG2252-PA... 27 7.0
AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB... 27 7.0
AY094875-1|AAM11228.1| 381|Drosophila melanogaster RE41410p pro... 27 9.2
AY071654-1|AAL49276.1| 384|Drosophila melanogaster RE73487p pro... 27 9.2
AE014297-4497|AAF56982.2| 384|Drosophila melanogaster CG7903-PA... 27 9.2
AE014296-2049|AAF50001.1| 381|Drosophila melanogaster CG7264-PA... 27 9.2
>AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p
protein.
Length = 204
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -1
Query: 252 IVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91
I VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 151 ICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 255
YW+AQD+SYKYFEVIL+D H AIRRDPKIN
Sbjct: 119 YWIAQDASYKYFEVILIDTHHSAIRRDPKIN 149
>AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L15
(YL10) protein homologueprotein.
Length = 204
Score = 87.0 bits (206), Expect = 8e-18
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -1
Query: 252 IVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 91
I VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 151 ICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = -2
Query: 347 YWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 255
YW+AQD+SYKYFEVIL+D H AIRRDPKIN
Sbjct: 119 YWIAQDASYKYFEVILIDTHHSAIRRDPKIN 149
>M23222-1|AAA28541.1| 1110|Drosophila melanogaster fsh protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.
Length = 2038
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>BT015270-1|AAT94499.1| 1110|Drosophila melanogaster LD26482p
protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AE014298-1111|AAS65279.1| 1110|Drosophila melanogaster CG2252-PE,
isoform E protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AE014298-1110|AAS65278.1| 1110|Drosophila melanogaster CG2252-PD,
isoform D protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AE014298-1109|AAS65277.1| 1110|Drosophila melanogaster CG2252-PC,
isoform C protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AE014298-1108|AAN09226.1| 1110|Drosophila melanogaster CG2252-PA,
isoform A protein.
Length = 1110
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB,
isoform B protein.
Length = 2038
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 261 DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGS 142
D+ + NA H H G G G GH + GGS
Sbjct: 586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGS 625
>AY094875-1|AAM11228.1| 381|Drosophila melanogaster RE41410p
protein.
Length = 381
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 171 VPCRDLGSCDQPKSDHASRDAYVQHSRSVDLRIA 272
V CRD + KSDH R+ +Q R ++ +A
Sbjct: 192 VGCRDKHLQEMAKSDHQMRNQVIQRVRQFNINMA 225
>AY071654-1|AAL49276.1| 384|Drosophila melanogaster RE73487p
protein.
Length = 384
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 297 GPVTQGHSS-RS*DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRR 136
GP +G S R+ +Q +NA H G G R G R GG+RR
Sbjct: 329 GPSKRGGSGGRNHNQNGINAYHSEFPPLGSGGGGPGQRNRFNGPRPGPNMGGNRR 383
>AE014297-4497|AAF56982.2| 384|Drosophila melanogaster CG7903-PA
protein.
Length = 384
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 297 GPVTQGHSS-RS*DQRIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRR 136
GP +G S R+ +Q +NA H G G R G R GG+RR
Sbjct: 329 GPSKRGGSGGRNHNQNGINAYHSEFPPLGSGGGGPGQRNRFNGPRPGPNMGGNRR 383
>AE014296-2049|AAF50001.1| 381|Drosophila melanogaster CG7264-PA
protein.
Length = 381
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 171 VPCRDLGSCDQPKSDHASRDAYVQHSRSVDLRIA 272
V CRD + KSDH R+ +Q R ++ +A
Sbjct: 192 VGCRDKHLQEMAKSDHQMRNQVIQRVRQFNINMA 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,738,862
Number of Sequences: 53049
Number of extensions: 301304
Number of successful extensions: 928
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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