Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0152.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   4.1  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    22   7.2  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    22   9.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   9.5  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    22   9.5  

>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 244 FHPQLLYELQQL*IHQCEHQDLSW 173
           F+  + YE+ +   H CE+ D +W
Sbjct: 72  FNRTMWYEIVRCARHFCEYDDYNW 95


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 163 LFSECNPVRSQWAKSDKCSCSQKRMLKMQC 74
           L ++C+  R    K D CS    R+   +C
Sbjct: 82  LLTQCDSNRGYCVKGDACSVRTFRLRSNRC 111


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 126 RKVTNAVVHRNAC*KCNAFLGVFLLFENLVSLLQY 22
           R V  A +  N C     F   F  F NLV+  QY
Sbjct: 113 RNVHTAELPNNCCQAYETFQCYFREFGNLVTCPQY 147


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 14/54 (25%), Positives = 20/54 (37%)
 Frame = +1

Query: 28   EETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLG 189
            E   K  KK K + + +    C    NC  H S         L + + A+  LG
Sbjct: 1046 EAARKKAKKAKAAFEKVKNERCTLFTNCCNHISDAIDAIYKQLSRNEAAQAYLG 1099


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 126 RKVTNAVVHRNAC*KCNAFLGVFLLFENLVSLLQY 22
           R V  A +  N C     F   F  F NLV+  QY
Sbjct: 113 RNVHTAELPNNCCQAYETFQCYFREFGNLVTCPQY 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,317
Number of Sequences: 2352
Number of extensions: 6342
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)