Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0152.Seq
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical ...   120   4e-28
AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...    54   5e-08
AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine am...    34   0.033
Z75955-9|CAB00123.1|  406|Caenorhabditis elegans Hypothetical pr...    30   0.53 
Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    29   1.6  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    29   1.6  
DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homo...    27   5.0  
AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditi...    27   5.0  
AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditi...    27   5.0  
AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.       27   5.0  

>AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical
           protein W08E12.7 protein.
          Length = 391

 Score =  120 bits (289), Expect = 4e-28
 Identities = 50/87 (57%), Positives = 67/87 (77%)
 Frame = +1

Query: 1   CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 180
           C+ GDKL+LE+T K++KKEK+  KGIA  TC+S++NCICH++P+ SE   +LK G + K+
Sbjct: 60  CDLGDKLILEKTGKLYKKEKNFTKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKV 119

Query: 181 DLGAHIDGFIAVVAHTVVVGESEVSDV 261
           DLG HIDG IA  AHTVVVG S+ + V
Sbjct: 120 DLGTHIDGLIATAAHTVVVGASKDNKV 146


>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = +1

Query: 25  LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 204
           LE T++   KE+  + G+AF T  S+N+C  H++P A +   +L+ GD+ KID G H+ G
Sbjct: 164 LETTSRRLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRG 222

Query: 205 FIAVVAHTV 231
            +   A TV
Sbjct: 223 RLIDSAFTV 231


>AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine
           aminopeptidase protein 1 protein.
          Length = 371

 Score = 34.3 bits (75), Expect = 0.033
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +1

Query: 85  STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE 243
           S C SVN  ICH  P   +    L+ GDL  +D+  +  GF   +  T +VG+
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD 221


>Z75955-9|CAB00123.1|  406|Caenorhabditis elegans Hypothetical
           protein R07B7.14 protein.
          Length = 406

 Score = 30.3 bits (65), Expect = 0.53
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 180
           C+FGDK +  E +K+ K          FS C  +       +P+A + + I KKG++ K+
Sbjct: 72  CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124

Query: 181 DL-GAHIDGFIAVVAHTVVVGESEVSDVL 264
           +L   H    IAV     +  + E S VL
Sbjct: 125 ELVKKHNRQLIAVTKEIAI--DDEFSKVL 151


>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4   EFGDKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAK 177
           +FG+++ L ET  +  ++KD  SK     +TC      + +  PI    D +++  D   
Sbjct: 321 QFGERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCT 379

Query: 178 IDLG 189
           +DLG
Sbjct: 380 MDLG 383


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4   EFGDKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAK 177
           +FG+++ L ET  +  ++KD  SK     +TC      + +  PI    D +++  D   
Sbjct: 321 QFGERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCT 379

Query: 178 IDLG 189
           +DLG
Sbjct: 380 MDLG 383


>DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homolog
           protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 166 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 59
           +LF E N  RS W +S  CSCS K+ +    L  SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501


>AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform a protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 166 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 59
           +LF E N  RS W +S  CSCS K+ +    L  SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501


>AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform b protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 166 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 59
           +LF E N  RS W +S  CSCS K+ +    L  SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501


>AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 166 LLFSECNPVRSQWAKSDKCSCSQKRMLKMQCLSWSL 59
           +LF E N  RS W +S  CSCS K+ +    L  SL
Sbjct: 467 VLFYEQNH-RSLWEQSQLCSCSPKQTIGDSSLIISL 501


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,386,151
Number of Sequences: 27780
Number of extensions: 154313
Number of successful extensions: 438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)