Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0152.Seq
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          25   0.42 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   9.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   9.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   9.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   9.1  
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      20   9.1  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 332 SQYQASETKSRFTSMMSCQQNI 267
           S Y+  ETKSRF S +  +Q I
Sbjct: 339 SHYEDGETKSRFISGIRSEQTI 360


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  LEETNKVFKKEKDSKKGIAFSTCVSVNN 108
           + E N + + +KD+K+ ++ ST   +NN
Sbjct: 423 MTEYNGLTEPKKDNKRKLSDSTMNKINN 450


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 368  TLFSEWLQXLHSSQYQASETKSRFTSM 288
            T  SEWL  +  S+Y  S  +S  T++
Sbjct: 925  TSVSEWLASIKMSRYAESFERSGVTTL 951


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 60  RLQERHCIFNMRFCEQLHLSLFAHCERTG 146
           RLQE   + ++R  ++LHL   A  E  G
Sbjct: 226 RLQENSPLLDLRQLQELHLQRNAIVEIAG 254



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +2

Query: 29  RRLTRFSKRRKTPRKALHFQHAFL*TTAFVTFRPLRANRI 148
           R L  F   R +  + L+ Q+  +     +TF PLR+  I
Sbjct: 855 RELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEI 894


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 130 WAKSDKCSCSQKRMLK 83
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 130 WAKSDKCSCSQKRMLK 83
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 130 WAKSDKCSCSQKRMLK 83
           WA +D  + +QKR LK
Sbjct: 136 WAITDPINYAQKRTLK 151


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 240 THNYCMSYNSYKS 202
           T ++C+ +N+Y+S
Sbjct: 4   TQHFCLRWNNYQS 16


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 240 THNYCMSYNSYKS 202
           T ++C+ +N+Y+S
Sbjct: 4   TQHFCLRWNNYQS 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,188
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)