Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0152.Seq
(399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 96 9e-21
At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 96 9e-21
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 50 8e-07
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 46 1e-05
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 46 1e-05
At1g13270.2 68414.m01540 metallopeptidase M24 family protein sim... 42 2e-04
At1g13270.1 68414.m01541 metallopeptidase M24 family protein sim... 42 2e-04
At4g37040.1 68417.m05246 metallopeptidase M24 family protein sim... 38 0.002
At3g25740.1 68416.m03205 metallopeptidase M24 family protein sim... 38 0.002
At2g45240.1 68415.m05632 methionyl aminopeptidase, putative / me... 29 0.86
At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolida... 29 1.5
At1g09300.1 68414.m01041 metallopeptidase M24 family protein sim... 27 6.1
>At3g51800.2 68416.m05681 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 401
Score = 95.9 bits (228), Expect = 9e-21
Identities = 43/86 (50%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 CEFGDKLVLEETNKVFKKEKDS-KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAK 177
CE GD + E+T ++K K ++G+AF TC+SVNN + HFSP+AS+ + +L+ GD+ K
Sbjct: 51 CEKGDSFIKEQTASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASD-ESVLEDGDMVK 109
Query: 178 IDLGAHIDGFIAVVAHTVVVGESEVS 255
ID+G HIDGFIA+V HT V+ E +S
Sbjct: 110 IDMGCHIDGFIALVGHTHVLQEGPLS 135
>At3g51800.1 68416.m05680 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 392
Score = 95.9 bits (228), Expect = 9e-21
Identities = 43/86 (50%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 CEFGDKLVLEETNKVFKKEKDS-KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAK 177
CE GD + E+T ++K K ++G+AF TC+SVNN + HFSP+AS+ + +L+ GD+ K
Sbjct: 51 CEKGDSFIKEQTASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASD-ESVLEDGDMVK 109
Query: 178 IDLGAHIDGFIAVVAHTVVVGESEVS 255
ID+G HIDGFIA+V HT V+ E +S
Sbjct: 110 IDMGCHIDGFIALVGHTHVLQEGPLS 135
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 49.6 bits (113), Expect = 8e-07
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = +1
Query: 25 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 204
LE T + E + GIAF T S+NN H++P + + +L+ D+ K+D G HIDG
Sbjct: 163 LENTVRKLISENGLQAGIAFPTGCSLNNVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDG 221
Query: 205 FIAVVAHTV 231
I A TV
Sbjct: 222 HIVDSAFTV 230
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 25 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 204
LE T + E + GIAF T S+N H++P + + +L+ D+ K+D G HIDG
Sbjct: 161 LENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDG 219
Query: 205 FIAVVAHTV 231
I A TV
Sbjct: 220 HIIDCAFTV 228
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 25 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 204
LE T + E + GIAF T S+N H++P + + +L+ D+ K+D G HIDG
Sbjct: 161 LENTVRKLISENGLQAGIAFPTGCSLNWVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDG 219
Query: 205 FIAVVAHTV 231
I A TV
Sbjct: 220 HIIDCAFTV 228
>At1g13270.2 68414.m01540 metallopeptidase M24 family protein
similar to SP|Q01662 Methionine aminopeptidase 1
precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 283
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 73 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE 243
G S C SVN C+CH P + + L+ GD+ ID+ ++DG+ + T GE
Sbjct: 184 GFPKSVCTSVNECMCHGIPDSRQ----LQSGDIINIDVTVYLDGYHGDTSRTFFCGE 236
>At1g13270.1 68414.m01541 metallopeptidase M24 family protein
similar to SP|Q01662 Methionine aminopeptidase 1
precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 369
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 73 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE 243
G S C SVN C+CH P + + L+ GD+ ID+ ++DG+ + T GE
Sbjct: 184 GFPKSVCTSVNECMCHGIPDSRQ----LQSGDIINIDVTVYLDGYHGDTSRTFFCGE 236
>At4g37040.1 68417.m05246 metallopeptidase M24 family protein
similar to SP|O33343 Methionine aminopeptidase (EC
3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 350
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 73 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG 240
G S C SVN CICH P S P L+ GD+ ID+ +++G+ + T G
Sbjct: 165 GFPKSVCTSVNECICHGIP-DSRP---LEDGDIINIDVTVYLNGYHGDTSATFFCG 216
>At3g25740.1 68416.m03205 metallopeptidase M24 family protein
similar to SP|O33343 Methionine aminopeptidase (EC
3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 344
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 73 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE 243
G S C SVN C+ H P S P L+ GD+ ID+ ++DG+ + T + G+
Sbjct: 157 GFPKSVCTSVNECMFHGIP-DSRP---LQNGDIINIDVAVYLDGYHGDTSKTFLCGD 209
>At2g45240.1 68415.m05632 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|Q01662 Methionine aminopeptidase
1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 398
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 85 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG 240
S C SVN ICH P A + L+ GD+ +D+ G + T VG
Sbjct: 203 SCCTSVNEVICHGIPDARK----LEDGDIVNVDVTVCYKGCHGDLNETYFVG 250
>At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolidase,
putative / imidodipeptidase, putative similar to
SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro
dipeptidase) (Proline dipeptidase) (Prolidase)
(Imidodipeptidase) {Homo sapiens}; contains Pfam
profiles PF00557: metallopeptidase family M24, PF05195:
Aminopeptidase P, N-terminal domain
Length = 333
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 88 TCVSV---NNCICHFSPIASEPDYILKKGDLAKIDLGA 192
TC+ N+ + H+ A+ D + GDLA +D+GA
Sbjct: 240 TCICATGDNSAVLHYGHAAAPNDRTFEDGDLALLDMGA 277
>At1g09300.1 68414.m01041 metallopeptidase M24 family protein
similar to SP|P15034 Xaa-Pro aminopeptidase (EC
3.4.11.9) (X-Pro aminopeptidase) (Aminopeptidase P II)
(Aminoacylproline aminopeptidase) {Escherichia coli};
contains Pfam profiles PF00557: metallopeptidase family
M24, PF05195: Aminopeptidase P, N-terminal domain
Length = 493
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 136 SEPDYILKKGDLAKIDLGAHIDGFIAVVAHT 228
S D +K GDL +D+G + G+++ + T
Sbjct: 281 SRNDQRIKDGDLVLMDMGCELHGYVSDLTRT 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,818,050
Number of Sequences: 28952
Number of extensions: 139149
Number of successful extensions: 387
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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