Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0151.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A6U8 Cluster: Putative ABC transporter protein; n=2; ...    35   1.2  
UniRef50_A0C5L2 Cluster: Chromosome undetermined scaffold_150, w...    35   1.2  
UniRef50_O44624 Cluster: Putative uncharacterized protein; n=2; ...    34   1.5  
UniRef50_Q4ABZ3 Cluster: 117M18_27; n=4; Magnoliophyta|Rep: 117M...    34   2.0  
UniRef50_Q3A3R1 Cluster: Flp pilus assembly protein TadB; n=1; P...    33   4.7  
UniRef50_Q7Q0G6 Cluster: ENSANGP00000017737; n=7; Eumetazoa|Rep:...    33   4.7  
UniRef50_UPI0000D576E1 Cluster: PREDICTED: similar to CG12002-PA...    32   6.2  
UniRef50_Q7RQ11 Cluster: CTA1p, putative; n=6; Plasmodium|Rep: C...    32   6.2  
UniRef50_Q58ZM1 Cluster: Thyroid peroxidase-like protein; n=3; E...    32   6.2  
UniRef50_Q92626 Cluster: Peroxidasin homolog; n=49; Eumetazoa|Re...    32   8.2  

>UniRef50_Q4A6U8 Cluster: Putative ABC transporter protein; n=2;
           Mycoplasma synoviae 53|Rep: Putative ABC transporter
           protein - Mycoplasma synoviae (strain 53)
          Length = 580

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -3

Query: 422 LNFDLDTEREK--RRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIEILEATCKRT 249
           + F LD    K  + A+   +      + N L+ +QND+V+ +++ +K   +LE   K  
Sbjct: 136 ITFGLDANPSKIGKEAKYYKEEKFIKNKINNLKQIQNDIVNLLKIKQKNQALLEKIQKHQ 195

Query: 248 ILFLSVMNFHSRKS 207
            ++  + N  S+K+
Sbjct: 196 AIYDKLKNKQSKKA 209


>UniRef50_A0C5L2 Cluster: Chromosome undetermined scaffold_150,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_150,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1547

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 21/77 (27%), Positives = 48/77 (62%)
 Frame = -3

Query: 401 EREKRRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIEILEATCKRTILFLSVMNF 222
           E E+RR+++ + + + + R NK+++LQ+++V   +++++R+E +E   K+  L L+V   
Sbjct: 314 EEEQRRSKQ-LHAELLDTRVNKVQNLQDEIVKQKKVIQQRVEEIEEQEKKNKL-LNVNYC 371

Query: 221 HSRKSKLVMYSTYILYF 171
              ++KL +  T +  F
Sbjct: 372 SLLQNKLNLLETQLKNF 388


>UniRef50_O44624 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 400

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 401 EREKRRARRDVDSNIT--NGRFNKLEHLQNDLVHTIEMLKKRIEILEATCK 255
           EREK R R++VDS  T    R N LE+ +   +  ++ LK+ +E  E   K
Sbjct: 121 EREKERDRKEVDSQFTILKNRINHLENEKEQCLSEVQELKRLLEDSEQDLK 171


>UniRef50_Q4ABZ3 Cluster: 117M18_27; n=4; Magnoliophyta|Rep:
           117M18_27 - Brassica campestris (Field mustard)
          Length = 543

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 245 LFLSVMNFHSRKSKLVMYSTYILYF*CFNIRTTLLHKVFQNSSKDL*YCQTVAIY*VHMH 66
           L L+ + F S   K+  Y+  +LYF    ++ T    V+    K L   QT A+  V  H
Sbjct: 364 LVLADLWFWSCNEKIREYTAQVLYFAVKTLKETGHEHVYDAVEKPLQLAQTAAVLEVQSH 423

Query: 65  FVMSLLLI 42
           F+++ L+I
Sbjct: 424 FLVASLVI 431


>UniRef50_Q3A3R1 Cluster: Flp pilus assembly protein TadB; n=1;
           Pelobacter carbinolicus DSM 2380|Rep: Flp pilus assembly
           protein TadB - Pelobacter carbinolicus (strain DSM 2380
           / Gra Bd 1)
          Length = 325

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -1

Query: 472 CEDLPSMDLRFWADCES*ILILIQRERSGELEEML 368
           CE +PS DLRF+A     I ++IQRE  G + E+L
Sbjct: 211 CERVPSTDLRFFA-----ISVIIQRETGGNVAEIL 240


>UniRef50_Q7Q0G6 Cluster: ENSANGP00000017737; n=7; Eumetazoa|Rep:
           ENSANGP00000017737 - Anopheles gambiae str. PEST
          Length = 613

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = -3

Query: 326 LQNDLVHTIEMLKKRIEILEATCKRTILFLSVMNFHSRKS 207
           +QN  +HT+  +K+ IE+LEA  K  ++  ++MN  S +S
Sbjct: 180 VQNLSLHTVHGMKECIELLEAGAKNRMVGATLMNIESSRS 219


>UniRef50_UPI0000D576E1 Cluster: PREDICTED: similar to CG12002-PA,
            isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG12002-PA, isoform A - Tribolium castaneum
          Length = 1388

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 496  EVQDGLVSCEDLPSMDLRFWADC 428
            E+Q G   CE++P +DL  W++C
Sbjct: 1290 ELQGGFSQCEEIPRVDLSVWSEC 1312


>UniRef50_Q7RQ11 Cluster: CTA1p, putative; n=6; Plasmodium|Rep:
           CTA1p, putative - Plasmodium yoelii yoelii
          Length = 208

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -3

Query: 422 LNFDLDTEREKRRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIEILEAT 261
           +   +DT +   +  + +  NI     NK+E LQ+DL   +E  K+  EIL +T
Sbjct: 82  IQMSIDTCKALEKTSKVLKKNIKKVNINKIEKLQDDLYDCMEDAKEIGEILSST 135


>UniRef50_Q58ZM1 Cluster: Thyroid peroxidase-like protein; n=3;
           Echinacea|Rep: Thyroid peroxidase-like protein -
           Lytechinus variegatus (Sea urchin)
          Length = 678

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 484 GLVSCEDLPSMDLRFWADC 428
           G   C  +PSMDLR WA+C
Sbjct: 554 GYKKCSSVPSMDLRLWAEC 572


>UniRef50_Q92626 Cluster: Peroxidasin homolog; n=49; Eumetazoa|Rep:
            Peroxidasin homolog - Homo sapiens (Human)
          Length = 1496

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 496  EVQDGLVSCEDLPSMDLRFWADC 428
            E   G  SC+++P +DLR W DC
Sbjct: 1310 EFPHGYGSCDEIPRVDLRVWQDC 1332


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,622,821
Number of Sequences: 1657284
Number of extensions: 7251115
Number of successful extensions: 17632
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17631
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)