Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0151.Seq
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical...    34   0.050
U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U47144-4|AAB52617.1|  171|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U64835-4|AAG24197.2|  343|Caenorhabditis elegans Serpentine rece...    27   5.7  
AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF039047-10|AAB94229.2|  400|Caenorhabditis elegans Hypothetical
           protein K11D12.9 protein.
          Length = 400

 Score = 34.3 bits (75), Expect = 0.050
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 401 EREKRRARRDVDSNIT--NGRFNKLEHLQNDLVHTIEMLKKRIEILEATCK 255
           EREK R R++VDS  T    R N LE+ +   +  ++ LK+ +E  E   K
Sbjct: 121 EREKERDRKEVDSQFTILKNRINHLENEKEQCLSEVQELKRLLEDSEQDLK 171


>U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical
           protein C01B7.1b protein.
          Length = 550

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 361 LESTSLRARRFSLSVSRSKFKIHSQPRNEDPLMANLHKI 477
           ++STS  A  F     ++K+     P +EDPL+ +L+ I
Sbjct: 340 IDSTSTLATLFGGGARKTKYDDGEMPHDEDPLLDSLNPI 378


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical
           protein C01B7.1a protein.
          Length = 935

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 361 LESTSLRARRFSLSVSRSKFKIHSQPRNEDPLMANLHKI 477
           ++STS  A  F     ++K+     P +EDPL+ +L+ I
Sbjct: 340 IDSTSTLATLFGGGARKTKYDDGEMPHDEDPLLDSLNPI 378


>U47144-4|AAB52617.1|  171|Caenorhabditis elegans Hypothetical
           protein ZC53.2 protein.
          Length = 171

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = -3

Query: 398 REKRRARRDVDSNITNGRFNKLEHLQNDLVHTIEMLKKRIE 276
           REK RA+  V S+  NG++ KLE + + ++ T  +++K  E
Sbjct: 113 REKLRAK--VHSDKYNGKYEKLEEMISKIITTKVLIQKEEE 151


>U64835-4|AAG24197.2|  343|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 25 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 206 KLVMYSTYILYF*CFNIRTTLLHKVFQNSSKDL*YCQTVAIY*VHMHFVMSLLLIHVLM 30
           KL++  +  ++    NI+T  L K F+N  K L    T+A   +   FV+ +++  VL+
Sbjct: 199 KLIVSLSAFIFMLITNIKTYQLTKKFKNKLKSLELSLTLATVVISAVFVIYIIIQAVLL 257


>AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical
           protein C09E7.5 protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -3

Query: 425 ILNFDLDTEREKRRARRDVDSNITNGRFNKLEHLQNDLV 309
           +L   L+ E+EK + R +      N +  ++EHL+  ++
Sbjct: 112 VLEETLEEEKEKNKKRDEASKKTLNSKNEEIEHLKKRVI 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,132,198
Number of Sequences: 27780
Number of extensions: 189130
Number of successful extensions: 506
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)