Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0149.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 223 TFCHDVKMKWLS 258
           TFCH V  KWL+
Sbjct: 397 TFCHMVSHKWLN 408


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -1

Query: 407 FIKYVFYCKNWYIGTWQDTNAPSSSYXLGHDDVYNFDI 294
           F+  ++Y  + +   WQ  N P+    L     YN  I
Sbjct: 9   FLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVI 46


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 327 FRPRRRIQFRHKHLQQHNDF 268
           F P   ++ +H H   H+DF
Sbjct: 119 FNPHEEVKLQHLHQFPHHDF 138



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 327 FRPRRRIQFRHKHLQQHNDFEK 262
           F P   I+ +H H  + N  E+
Sbjct: 103 FNPHHEIKLQHLHQSKFNPHEE 124


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 259 VFFKIIVLLEMLMSKLYTSSW 321
           V+F I  +LEML+ K  T ++
Sbjct: 157 VYFLIYAVLEMLLQKYKTVTY 177


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/33 (21%), Positives = 17/33 (51%)
 Frame = -1

Query: 317 DDVYNFDISISNNTMILKKTESHFILTSWQNVR 219
           +D+Y+  + +++N  +         LT WQ+ +
Sbjct: 350 EDIYSDLLDLTDNNELFHLGSDEVNLTCWQDTK 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,438
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)