Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0148.Seq
(497 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67280-1|AAB97725.1| 315|Homo sapiens calumenin protein. 81 2e-15
CR541835-1|CAG46634.1| 315|Homo sapiens CALU protein. 81 2e-15
CR457039-1|CAG33320.1| 315|Homo sapiens CALU protein. 81 2e-15
BT020143-1|AAV38945.1| 315|Homo sapiens calumenin protein. 81 2e-15
BT006826-1|AAP35472.1| 315|Homo sapiens calumenin protein. 81 2e-15
BC013383-1|AAH13383.1| 315|Homo sapiens calumenin protein. 81 2e-15
AF345637-1|AAK72908.1| 315|Homo sapiens calumenin protein. 81 2e-15
AF257659-1|AAF76141.1| 296|Homo sapiens crocalbin-like protein ... 81 2e-15
AF013759-1|AAC17216.1| 315|Homo sapiens calumein protein. 81 2e-15
D42073-1|BAA07670.1| 331|Homo sapiens reticulocalbin protein. 62 1e-09
BC010120-1|AAH10120.1| 331|Homo sapiens reticulocalbin 1, EF-ha... 62 1e-09
AY423728-1|AAS00491.1| 165|Homo sapiens proliferation-inducing ... 62 1e-09
BC013436-1|AAH13436.1| 328|Homo sapiens reticulocalbin 3, EF-ha... 56 7e-08
AY358423-1|AAQ88789.1| 328|Homo sapiens MWRP239 protein. 56 7e-08
AY195859-1|AAO43054.1| 328|Homo sapiens reticulocalbin 3 precur... 56 7e-08
AF183423-1|AAG09692.1| 328|Homo sapiens reticulocabin precursor... 56 7e-08
X78669-1|CAA55343.1| 317|Homo sapiens EF-hand protein protein. 46 1e-04
BT009790-1|AAP88792.1| 317|Homo sapiens reticulocalbin 2, EF-ha... 46 1e-04
BC004892-1|AAH04892.1| 317|Homo sapiens reticulocalbin 2, EF-ha... 46 1e-04
AM231187-1|CAJ77183.1| 542|Homo sapiens autogenous vein graft r... 30 5.1
>U67280-1|AAB97725.1| 315|Homo sapiens calumenin protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>CR541835-1|CAG46634.1| 315|Homo sapiens CALU protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>CR457039-1|CAG33320.1| 315|Homo sapiens CALU protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>BT020143-1|AAV38945.1| 315|Homo sapiens calumenin protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>BT006826-1|AAP35472.1| 315|Homo sapiens calumenin protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>BC013383-1|AAH13383.1| 315|Homo sapiens calumenin protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>AF345637-1|AAK72908.1| 315|Homo sapiens calumenin protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>AF257659-1|AAF76141.1| 296|Homo sapiens crocalbin-like protein
protein.
Length = 296
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 252 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 296
>AF013759-1|AAC17216.1| 315|Homo sapiens calumein protein.
Length = 315
Score = 81.4 bits (192), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
RHLV+E+D + D KLTK EI+DKYDLFVGSQATDFGEAL RHDEF
Sbjct: 271 RHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF 315
>D42073-1|BAA07670.1| 331|Homo sapiens reticulocalbin protein.
Length = 331
Score = 61.7 bits (143), Expect = 1e-09
Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALAR-HDE 155
RHLV+E+D + DEKLTK EI++ +++FVGSQAT++GE L + HDE
Sbjct: 286 RHLVYESDKNKDEKLTKEEILENWNMFVGSQATNYGEDLTKNHDE 330
>BC010120-1|AAH10120.1| 331|Homo sapiens reticulocalbin 1, EF-hand
calcium binding domain protein.
Length = 331
Score = 61.7 bits (143), Expect = 1e-09
Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALAR-HDE 155
RHLV+E+D + DEKLTK EI++ +++FVGSQAT++GE L + HDE
Sbjct: 286 RHLVYESDKNKDEKLTKEEILENWNMFVGSQATNYGEDLTKNHDE 330
>AY423728-1|AAS00491.1| 165|Homo sapiens proliferation-inducing
gene 20 protein protein.
Length = 165
Score = 61.7 bits (143), Expect = 1e-09
Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALAR-HDE 155
RHLV+E+D + DEKLTK EI++ +++FVGSQAT++GE L + HDE
Sbjct: 120 RHLVYESDKNKDEKLTKEEILENWNMFVGSQATNYGEDLTKNHDE 164
>BC013436-1|AAH13436.1| 328|Homo sapiens reticulocalbin 3, EF-hand
calcium binding domain protein.
Length = 328
Score = 56.0 bits (129), Expect = 7e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDE 155
HL+ E+D D D +L+KAEI+ +++FVGSQAT++GE L RH +
Sbjct: 284 HLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHD 326
>AY358423-1|AAQ88789.1| 328|Homo sapiens MWRP239 protein.
Length = 328
Score = 56.0 bits (129), Expect = 7e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDE 155
HL+ E+D D D +L+KAEI+ +++FVGSQAT++GE L RH +
Sbjct: 284 HLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHD 326
>AY195859-1|AAO43054.1| 328|Homo sapiens reticulocalbin 3 precursor
protein.
Length = 328
Score = 56.0 bits (129), Expect = 7e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDE 155
HL+ E+D D D +L+KAEI+ +++FVGSQAT++GE L RH +
Sbjct: 284 HLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHD 326
>AF183423-1|AAG09692.1| 328|Homo sapiens reticulocabin precursor
protein.
Length = 328
Score = 56.0 bits (129), Expect = 7e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDE 155
HL+ E+D D D +L+KAEI+ +++FVGSQAT++GE L RH +
Sbjct: 284 HLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHD 326
>X78669-1|CAA55343.1| 317|Homo sapiens EF-hand protein protein.
Length = 317
Score = 45.6 bits (103), Expect = 1e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
HL+ E D + D+KL++ EI++ DLF+ S+ATD+G L HD++
Sbjct: 270 HLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQL--HDDY 311
>BT009790-1|AAP88792.1| 317|Homo sapiens reticulocalbin 2, EF-hand
calcium binding domain protein.
Length = 317
Score = 45.6 bits (103), Expect = 1e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
HL+ E D + D+KL++ EI++ DLF+ S+ATD+G L HD++
Sbjct: 270 HLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQL--HDDY 311
>BC004892-1|AAH04892.1| 317|Homo sapiens reticulocalbin 2, EF-hand
calcium binding domain protein.
Length = 317
Score = 45.6 bits (103), Expect = 1e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
HL+ E D + D+KL++ EI++ DLF+ S+ATD+G L HD++
Sbjct: 270 HLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQL--HDDY 311
>AM231187-1|CAJ77183.1| 542|Homo sapiens autogenous vein graft
remodeling associated protein 4 protein.
Length = 542
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -2
Query: 271 NYIICIVTLLHRICDMCVCVIIRRNFVSALRKKLGYF*NSSCLASASPKSVACEP 107
N C+ L HR CD CVI F AL + L + + C + K V+C P
Sbjct: 419 NLCFCLHCLQHRSCDRLTCVICLNMF--ALSQDLIFHDSKHCF-NIMIKCVSCYP 470
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,328,831
Number of Sequences: 237096
Number of extensions: 965130
Number of successful extensions: 1323
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -