Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0148.Seq
(497 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p pro... 87 2e-17
AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p pro... 87 2e-17
AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,... 87 2e-17
AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,... 87 2e-17
AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,... 87 2e-17
AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling... 85 5e-17
AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p pro... 46 2e-05
AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC... 46 2e-05
AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB... 46 2e-05
AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA... 46 2e-05
>BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p
protein.
Length = 329
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQATDFGEALARHDEF
Sbjct: 285 KHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
>AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p
protein.
Length = 329
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQATDFGEALARHDEF
Sbjct: 285 KHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
>AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,
isoform B protein.
Length = 192
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQATDFGEALARHDEF
Sbjct: 148 KHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 192
>AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,
isoform C protein.
Length = 329
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQATDFGEALARHDEF
Sbjct: 285 KHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
>AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,
isoform A protein.
Length = 329
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/45 (84%), Positives = 43/45 (95%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQATDFGEALARHDEF
Sbjct: 285 KHLLFEADADHDDKLTKEEILDKYDVFVGSQATDFGEALARHDEF 329
>AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling
factor protein.
Length = 193
Score = 85.0 bits (201), Expect = 5e-17
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +3
Query: 24 RHLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEALARHDEF 158
+HL+FEADAD D+KLTK EI+DKYD+FVGSQ TDFGEALARHDEF
Sbjct: 149 KHLLFEADADHDDKLTKEEILDKYDVFVGSQTTDFGEALARHDEF 193
>AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p
protein.
Length = 342
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEAL 140
HL D D D++L+ EI++ YD FVGS+ATD+G+ L
Sbjct: 295 HLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHL 332
>AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC,
isoform C protein.
Length = 342
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEAL 140
HL D D D++L+ EI++ YD FVGS+ATD+G+ L
Sbjct: 295 HLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHL 332
>AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB,
isoform B protein.
Length = 342
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEAL 140
HL D D D++L+ EI++ YD FVGS+ATD+G+ L
Sbjct: 295 HLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHL 332
>AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA,
isoform A protein.
Length = 342
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 27 HLVFEADADADEKLTKAEIIDKYDLFVGSQATDFGEAL 140
HL D D D++L+ EI++ YD FVGS+ATD+G+ L
Sbjct: 295 HLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHL 332
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,336,908
Number of Sequences: 53049
Number of extensions: 302372
Number of successful extensions: 521
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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