Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0147.Seq
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    36   0.14 
CR457202-1|CAG33483.1|  239|Homo sapiens F-LANa protein.               30   5.4  
BC010890-1|AAH10890.1|  239|Homo sapiens Der1-like domain family...    30   5.4  
AF242523-1|AAF99603.1|  239|Homo sapiens hypothetical transmembr...    30   5.4  
AF208065-1|AAL14869.1|  239|Homo sapiens F-LANa protein.               30   5.4  
AF151859-1|AAD34096.1|  209|Homo sapiens CGI-101 protein protein.      30   5.4  
AF132289-1|AAG43049.1|  239|Homo sapiens F-LAN-1 protein.              30   5.4  
AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens ...    30   7.2  
U40434-1|AAC50348.1|  628|Homo sapiens mesothelin or CAK1 antige...    29   9.5  
AK126811-1|BAC86704.1|  254|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 203 FFYLFNFIYIKIFCK-*SFVYFYLCIKLFLILRCVYKYLFIY 81
           F Y+F FIYI I+     +VY YL I  F I   +Y Y+FIY
Sbjct: 12  FMYIFIFIYIFIYIYIYVYVYIYLYI-YFYIFTYIYLYIFIY 52



 Score = 35.1 bits (77), Expect = 0.19
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = -3

Query: 224 VFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFL-----ILRCVYKYLFIY 81
           +FI    F Y++ ++Y+ I+    ++YFY+   ++L     I  C+Y YL+IY
Sbjct: 15  IFIFIYIFIYIYIYVYVYIYL---YIYFYIFTYIYLYIFIYIYICLYIYLYIY 64



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -3

Query: 296 YFKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK*SFVYFYLCIKLFL 117
           Y   YI   L + LY +     T ++I    F YL  FIYI I C   F+Y ++ I +++
Sbjct: 48  YIFIYIYICLYIYLY-IYLYIFTYIYIYLHIFIYLHIFIYICI-CLYIFIYVFIYINIYM 105



 Score = 30.7 bits (66), Expect = 4.1
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 148 YIFIYVSSYF*SFD-VYINIYLFINV*FEWRCPFFLYKNLYLSRFIY 11
           Y++IY+  Y   F  ++I IY+++ V       F+++  +YL  FIY
Sbjct: 6   YVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIY 52


>CR457202-1|CAG33483.1|  239|Homo sapiens F-LANa protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>BC010890-1|AAH10890.1|  239|Homo sapiens Der1-like domain family,
           member 2 protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>AF242523-1|AAF99603.1|  239|Homo sapiens hypothetical transmembrane
           protein SBBI53 protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>AF208065-1|AAL14869.1|  239|Homo sapiens F-LANa protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>AF151859-1|AAD34096.1|  209|Homo sapiens CGI-101 protein protein.
          Length = 209

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>AF132289-1|AAG43049.1|  239|Homo sapiens F-LAN-1 protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 293 FKFYIVPVLLLSLYNLCRQSITLVFI*KVFFFYLFNFIYIKIFCK 159
           F+ Y  P L+   + + R     +F   V F +LFN I++  +C+
Sbjct: 39  FQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCR 83


>AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44172 fis, clone THYMU2036085. ).
          Length = 203

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = -3

Query: 200 FYLFNFIYIKIFCK*SFVYFYLCIKLFL-----ILRCVYKYLFIY*CII*VAMS 54
           F L  F+++  FC   +++FYLC+ ++      +L+ V+ +L +  C+   ++S
Sbjct: 78  FPLSLFVFLISFCFSEYLHFYLCVSVYFSVYLSVLQSVFLFLALRQCLFLSSLS 131


>U40434-1|AAC50348.1|  628|Homo sapiens mesothelin or CAK1 antigen
           precursor protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 412 GKYDAPKNGVLLTQLKLHTCEPRQLXGFSVSRLIG 516
           G   AP  GVL T   + +  PRQL GF  + + G
Sbjct: 40  GTESAPLGGVLTTPHNISSLSPRQLLGFPCAEVSG 74


>AK126811-1|BAC86704.1|  254|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44861 fis, clone BRALZ2008930. ).
          Length = 254

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +3

Query: 474 AETAXRF*CK*AYRPSSWASWGRPFPSL 557
           A TA    CK A R  SW+ W  P PSL
Sbjct: 155 ARTAAAPRCKQACRYKSWSPWASPHPSL 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,105,131
Number of Sequences: 237096
Number of extensions: 1192647
Number of successful extensions: 5831
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5826
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)