Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0146.Seq
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0065 - 11073816-11074384,11074605-11075160                       29   2.7  
04_04_0632 + 26738969-26739350,26739535-26739543,26739674-267405...    27   8.4  

>06_02_0065 - 11073816-11074384,11074605-11075160
          Length = 374

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 113 TTFLYLDKYSAIHAHSQRPAIYVYTHTLSRII 208
           TT L   + SA+  H Q+P+  +  HTL  +I
Sbjct: 85  TTHLKQQQQSAVSRHEQKPSFLITPHTLDSMI 116


>04_04_0632 +
           26738969-26739350,26739535-26739543,26739674-26740545,
           26743048-26743098,26743966-26744127,26744278-26744519,
           26744772-26744859,26744964-26745158
          Length = 666

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +2

Query: 203 IIIFIMNDDEIEREKKLKQELFL*RLGINNRIQSAVTQVTIVRF*GK 343
           +IIFI+N +E + EK + + + L     +N +Q  V +V  +R  GK
Sbjct: 424 MIIFILNANENKGEKSIPRTVMLDTKTGSNLLQWPVVEVENLRMRGK 470


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,072,320
Number of Sequences: 37544
Number of extensions: 160768
Number of successful extensions: 288
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)