Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0145.Seq
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   7.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 200 YCHLIIRRHYYF*SVCVYHGGCSIV 274
           YC  II   +    +C+YH  C+ +
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFCAFI 174


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 266 NSRHDTHTHFRNNNVYELSNDNR 198
           N+ ++++ H+R NN     NDNR
Sbjct: 379 NNGNNSNNHWRKNN----PNDNR 397


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 194 LLYCHLIIRRHYY 232
           L YC+  I++H Y
Sbjct: 19  LFYCYKTIKQHIY 31


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 194 LLYCHLIIRRHYY 232
           L YC+  I++H Y
Sbjct: 19  LFYCYKTIKQHIY 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,111
Number of Sequences: 336
Number of extensions: 1298
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)