Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0144.Seq
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.56
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.56
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.56
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 3.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.3
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 6.9
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 6.9
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 21 9.2
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 21 9.2
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 3 RPVANESEPLEVKFGITLQQIID 25
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.56
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 255 KPFSNEGKPLVVQFTVKHEQDID 323
+P +NE +PL V+F + +Q ID
Sbjct: 71 RPVANESEPLEVKFGITLQQIID 93
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 331 PPQSMSCSCLTVNWTTKGLPSLLNGLTYGREHRTS 227
P Q+ SCSCL + + L + + R H S
Sbjct: 320 PSQASSCSCLDCDEIRESLDTQFLQVCRSRRHSDS 354
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 3.0
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 367 CSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLP--SLLNGLTYGREHRTSHLQR 215
C+S + T R P C T N++T P S++ T R+ + Q+
Sbjct: 751 CASTTTITARSPQGSQGLLQCATSNYSTTRWPATSVITTTTGARQQQQQQQQQ 803
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 542 SQIRVYKMCVDTSFAADIFFDEMVLTLVTEDYVYLL 435
+Q RVY + A IF D V+ + YV+++
Sbjct: 227 AQARVYLLYASKMDANVIFQDAAVMNMTGAGYVWIV 262
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 459 YKGKNHLIKKDIRCKGCVYT 518
Y +NH K +C+ C Y+
Sbjct: 6 YHLRNHFGSKPFKCEKCSYS 25
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +3
Query: 444 HVIFSYKGKNHLIKKDIRCKGCVYTH 521
H+++ ++G ++ KD R + Y H
Sbjct: 213 HLVYPFEGDIRIVNKDRRGELFYYMH 238
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 107 HESSGNFSSKNTSQFIEDNASKLTTTSTTA 18
HE N+ SKN +Q + + + S TA
Sbjct: 184 HEKLRNWFSKNVNQTVAETVRIIYGGSVTA 213
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 104 ESSGNFSSKNTSQFIE 57
+ +GNF+ KNT ++
Sbjct: 74 DENGNFNEKNTRDIVQ 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,731
Number of Sequences: 438
Number of extensions: 3787
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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