Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0143.Seq
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.0  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -1

Query: 73  NSRSYFVLFNFNNVIYLNEIQYI 5
           N  +YF+L++FN++   ++  ++
Sbjct: 381 NEGTYFILYDFNDIFEKDQASFL 403


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -1

Query: 73  NSRSYFVLFNFNNVIYLNEIQYI 5
           N  +YF+L++FN++   ++  ++
Sbjct: 381 NEGTYFILYDFNDIFEKDQASFL 403


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 97  YSFSRHXRNSRSYFVLFNFNN 35
           ++FSR   ++ S + + NF+N
Sbjct: 490 FAFSRETEDNGSLYAILNFSN 510



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LIILHYTRIYETLTFXDYELDXP 293
           ++I  YT +  T+ + DY  D P
Sbjct: 283 MLIEAYTNLSMTMKYYDYGADFP 305


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 82  DVKMNNFILII*NTPVTIXYGHCAXFFSNLQSVKG 186
           DVK+ N +L I N      +G C      L S+ G
Sbjct: 722 DVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVG 756


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 82  DVKMNNFILII*NTPVTIXYGHCAXFFSNLQSVKG 186
           DVK+ N +L I N      +G C      L S+ G
Sbjct: 760 DVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVG 794


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 97  YSFSRHXRNSRSYFVLFNFNN 35
           ++FSR   ++ S + + NF+N
Sbjct: 490 FAFSRETEDNGSLYAILNFSN 510



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LIILHYTRIYETLTFXDYELDXP 293
           ++I  YT +  T+ + DY  D P
Sbjct: 283 MLIEAYTNLSMTMKYYDYGADFP 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,881
Number of Sequences: 438
Number of extensions: 2096
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)