Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0142.Seq
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.5  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   2.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   6.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.9  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   7.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 162 EVEQRVHNRQGHEGVHLAAARQGHPPHHR 76
           E +QR  + Q H G   AAA    PP HR
Sbjct: 896 EQQQRSSSSQQHRGPGAAAATGPPPPTHR 924


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 186  LHGTHLRHEVEQRVHNRQGHEGVHLAAA 103
            L+ +HL H +    H+  G EGV +  A
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA 1336


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +2

Query: 56  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP 181
           C  P P++       +    C P C C+      T +  CVP
Sbjct: 34  CCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFGNCVP 75


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 377 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 466
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 93   HPPHHRRGAGQAHRSQGRRAVG 28
            HP HH  G+G++ +  G   VG
Sbjct: 1402 HPHHHHNGSGRS-KPPGPEGVG 1422


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 178 PVESLMCTMSKEPGCLSRDTMVPTRPS 258
           P+E L C    E G +SRD   P   S
Sbjct: 400 PIEKLRCYRCLERGHVSRDCHSPVNHS 426


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,084
Number of Sequences: 2352
Number of extensions: 14883
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)