Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0142.Seq
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 142 2e-34
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.002
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.12
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 29 2.7
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 4.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 4.6
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 8.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 8.1
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 142 bits (344), Expect = 2e-34
Identities = 68/120 (56%), Positives = 84/120 (70%)
Frame = -3
Query: 610 RLIGKLGLTLTYPAGFMNVVSIEKTNELFSSNL*VKGRFTIHRITPEEAKYKLCKVKRVA 431
R+ GK+ +P GFM+VV+IE+TNE F KGR+ +HRI EA +KLCKVK V
Sbjct: 70 RVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVR 129
Query: 430 TGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 251
T K VP L T DGRTIRYPDP +KVND+I +I+T KI D +KFE GNL +TGGRN+G
Sbjct: 130 TVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVG 189
Score = 110 bits (265), Expect = 7e-25
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = -2
Query: 284 LVYDHGRP*LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 105
L Y G +GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +SLP
Sbjct: 179 LAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLP 238
Query: 104 RGKGIRLTIAEERDKRIAAK 45
G GIRL+IAEERDKR+A K
Sbjct: 239 TGAGIRLSIAEERDKRMAQK 258
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 64
HHR E AH G HGTH H E H+ H G H + H P H G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459
Query: 63 QAHRS 49
+ H +
Sbjct: 460 EHHHA 464
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 79
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = -1
Query: 252 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHR 76
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGE 521
Query: 75 RGAGQAHRSQGRRA 34
G H + A
Sbjct: 522 HGTHHGHHGEHHHA 535
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -1
Query: 204 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 55
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 64
HH P H G HG H H GH G H H P H G
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHH 689
Query: 63 QAHRSQG 43
AH G
Sbjct: 690 GAHHEHG 696
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 64
HH P H H HG H H H G G H H P H G
Sbjct: 509 HHHAPAHHGH---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHG 565
Query: 63 QAHRS 49
+ H +
Sbjct: 566 EHHHA 570
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -1
Query: 246 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 70
GHH H H G HG H H H+ GH G H A H HH
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAHHHHA--PHHEHHEHH 643
Query: 69 AGQAHRSQG 43
H S G
Sbjct: 644 GDHHHGSHG 652
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 76
HH E H H G HG+ H HE H+ H G H H HH
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617
Query: 75 RGAGQAHRSQG 43
G G H G
Sbjct: 618 AGYGAHHGHHG 628
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = -1
Query: 246 GHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAARQGHPP--- 85
G H T L H H G HGTH H H+ HE G H A H
Sbjct: 652 GVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKEN 711
Query: 84 HHRRGAGQAH 55
HH G H
Sbjct: 712 HHHHGHHSKH 721
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -1
Query: 198 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 34
AH G HG H H H+ GH G H GH H A H + A
Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = -1
Query: 198 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 55
AH G HG H H H G H G H GH H A H
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 67
HH P H HG H H GH G H + A G H HH A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514
Query: 66 GQAHRSQ 46
H +
Sbjct: 515 HHGHHGE 521
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -1
Query: 198 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 46
AH G HG H H G GVH + H H A H +
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 204 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH-RRGAGQAH 55
H H G H +H H G GVH G+ HH GA H
Sbjct: 583 HGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Frame = -1
Query: 246 GHHRVPRETSRLLRHCAHQGLH----GTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 79
G H P H H G H H HE H+ H G H H P H
Sbjct: 411 GTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHH---GEHHHAPAH 467
Query: 78 RRGAGQAHRS 49
G+ H +
Sbjct: 468 HGHHGEHHHA 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/68 (25%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = -1
Query: 243 HHRVPRETSRLLRHCAHQGLHG---THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 73
HH P H H G HG + H H+ H G H G H
Sbjct: 532 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHE 591
Query: 72 GAGQAHRS 49
G H +
Sbjct: 592 SHGHGHHA 599
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 204 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 43
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 0.31
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 204 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 79
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 189 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 40
G HG H RH R GH G +R G P G H GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333
Score = 21.4 bits (43), Expect(2) = 0.31
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 90 PPHHRRGAGQAHRSQGRRA 34
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = -3
Query: 502 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 371
G+ + R+T E Y+ CK+++ A K VP Y+V H R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 56 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 175
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 56 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 175
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 56 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 175
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 56 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 175
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 345 ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLTHR 515
E ++ + G V P C Y PVA + H Y A + ++R N P T R
Sbjct: 868 EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPETLR 923
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 386 HHPLPRPTYQSQRFHPVRHRNYEDYGLH 303
HH PTY F+P H++Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 286 NLCMITGGRNLGVWAPSCPARDIPAPSTLCTSRT 185
N C + + L V A CP R++ T CT ++
Sbjct: 440 NGCRMVSDKGLAVLAKRCPLREVRIRGTACTDKS 473
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 286 NLCMITGGRNLGVWAPSCPARDIPAPSTLCTSRT 185
N C + + L V A CP R++ T CT ++
Sbjct: 440 NGCRMVSDKGLAVLAKRCPLREVRIRGTACTDKS 473
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 92 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 181
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 219 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 43
+R RH H+G HG ++H H H R G H P+ H +
Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143
Query: 42 RRAV 31
+R++
Sbjct: 144 KRSI 147
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 56 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 175
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 95 PCRAAARCTPSCPCRL*TRCSTSWRRCVP-WSP*CAQCRRSRDVSRGTRWCPHAQVTASR 271
P AA+C P C R S + C+P SP C Q + + P Q T +
Sbjct: 345 PTPCAAQCMPLCESSCIARLSCV-QTCMPACSPTCVQNYAAGPIQCAPACMPLCQPTCVQ 403
Query: 272 DHTQV 286
H +V
Sbjct: 404 QHAEV 408
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 147 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 52
VH+ H+G H R+ H HH G H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -1
Query: 195 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 70
H G TH H+ + GH G H + + H H G
Sbjct: 43 HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 97 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 213
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 97 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 213
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,718,010
Number of Sequences: 27780
Number of extensions: 335810
Number of successful extensions: 1103
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -