Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0139.Seq
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro...    30   2.4  
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,...    30   2.4  
AY051952-1|AAK93376.1| 1394|Drosophila melanogaster LD42267p pro...    30   3.1  
AE014134-2940|AAF53674.3| 1394|Drosophila melanogaster CG10211-P...    30   3.1  

>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
           protein.
          Length = 1325

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 332 CEVLCLSDDNKLVLKAIFFPFIIIKQERFISRNTNTRNIVVDYKTNKKK 186
           C +LCL +D + V+ A   P  + +    +  NTN  +I  D + +KKK
Sbjct: 544 CSMLCLGEDEEPVVLA--SPAPLTQLTAAVLTNTNNNHIYADLELDKKK 590


>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
           isoform A protein.
          Length = 1325

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 332 CEVLCLSDDNKLVLKAIFFPFIIIKQERFISRNTNTRNIVVDYKTNKKK 186
           C +LCL +D + V+ A   P  + +    +  NTN  +I  D + +KKK
Sbjct: 544 CSMLCLGEDEEPVVLA--SPAPLTQLTAAVLTNTNNNHIYADLELDKKK 590


>AY051952-1|AAK93376.1| 1394|Drosophila melanogaster LD42267p
           protein.
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 389 VLNYFSSVSVPGFWTLYFCTYLKKKKEAKHDKIMSVKLLSRS 514
           + N F++ ++P FW++Y    L KK  A H+ ++S+  L +S
Sbjct: 341 IYNEFATAAMPAFWSMYPPEMLAKKMSA-HE-LLSIAALQKS 380


>AE014134-2940|AAF53674.3| 1394|Drosophila melanogaster CG10211-PA
           protein.
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 389 VLNYFSSVSVPGFWTLYFCTYLKKKKEAKHDKIMSVKLLSRS 514
           + N F++ ++P FW++Y    L KK  A H+ ++S+  L +S
Sbjct: 341 IYNEFATAAMPAFWSMYPPEMLAKKMSA-HE-LLSIAALQKS 380


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,699,018
Number of Sequences: 53049
Number of extensions: 319472
Number of successful extensions: 578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)