Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0135.Seq
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7K480 Cluster: Probable methyltransferase bin3; n=4; c...    37   0.34 
UniRef50_Q869U8 Cluster: Similar to Plasmodium falciparum (Isola...    35   1.4  
UniRef50_A4XM41 Cluster: CRISPR-associated autoregulator, DevR f...    34   3.2  
UniRef50_Q9LR10 Cluster: F10A5.10; n=4; core eudicotyledons|Rep:...    34   3.2  
UniRef50_UPI000023F3B4 Cluster: hypothetical protein FG01827.1; ...    33   5.6  
UniRef50_UPI00015B6253 Cluster: PREDICTED: similar to CG33715-PD...    33   7.4  
UniRef50_Q22Z50 Cluster: F-actin capping protein alpha subunit c...    32   9.8  
UniRef50_A5DL63 Cluster: Predicted protein; n=1; Pichia guillier...    32   9.8  

>UniRef50_Q7K480 Cluster: Probable methyltransferase bin3; n=4;
           cellular organisms|Rep: Probable methyltransferase bin3
           - Drosophila melanogaster (Fruit fly)
          Length = 1367

 Score = 37.1 bits (82), Expect = 0.34
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 21  GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
           G++SDP+N   SL    TS+ +S  +TP+T    S IT+P     ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364


>UniRef50_Q869U8 Cluster: Similar to Plasmodium falciparum (Isolate
           3D7). Asparagine-rich antigen; n=2; Dictyostelium
           discoideum|Rep: Similar to Plasmodium falciparum
           (Isolate 3D7). Asparagine-rich antigen - Dictyostelium
           discoideum (Slime mold)
          Length = 796

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +2

Query: 401 VKNAXSNN--NPXKTERSVIXXIXTISVWLXEIQXKYXEKQCXEKNLQKRLEKLRSLH 568
           +KN  +N+  N     RS++  + TI      +Q ++ E++  EK L+K LEKLRS H
Sbjct: 578 IKNELTNSLKNWDNANRSLVKMVRTIPTTNPNLQKEWTEQEATEK-LKKLLEKLRSNH 634


>UniRef50_A4XM41 Cluster: CRISPR-associated autoregulator, DevR
           family; n=1; Caldicellulosiruptor saccharolyticus DSM
           8903|Rep: CRISPR-associated autoregulator, DevR family -
           Caldicellulosiruptor saccharolyticus (strain ATCC 43494
           / DSM 8903)
          Length = 309

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +2

Query: 359 EKSYDLXINXELDTVKNAXSNNNPXKTERSVIXXIXTISVWLXEIQXKYXEK--QCXEKN 532
           E   D+     L+  K A +N NP + E+       T+SV L  +   + EK     E  
Sbjct: 120 EYKNDIEFATNLNLAKRANTNPNPYQLEQHKSLYTYTVSVDLDRLGRDFDEKGNVIEEVP 179

Query: 533 LQKRLEKLRSLHNYIXYLNEII 598
           +++RL++L +L + I +L+  I
Sbjct: 180 IEERLKRLYTLFDAIKFLSREI 201


>UniRef50_Q9LR10 Cluster: F10A5.10; n=4; core eudicotyledons|Rep:
           F10A5.10 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 462

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 36  PINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPK 170
           P N+E      PTS     RD P TD+  +Q   P  P++ VPPK
Sbjct: 8   PENAEAPQKHKPTSSKRKKRDNP-TDQTQTQKHKPQKPKKAVPPK 51


>UniRef50_UPI000023F3B4 Cluster: hypothetical protein FG01827.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG01827.1 - Gibberella zeae PH-1
          Length = 936

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +3

Query: 6   ILQSPGSLSDPINS-ELSLSVTPTSDDTSLRDT---PSTDEGISQITSPDLPRQVVPPKL 173
           IL+S G+ SD  +  E +    P +  TS  +T   PST + I+Q TSPD PRQ  P   
Sbjct: 744 ILKSLGTKSDDEDDDEDATPALPEARGTSATETEGGPSTAQTITQTTSPD-PRQPPPEIK 802

Query: 174 TYSDVV 191
           +  DVV
Sbjct: 803 SDRDVV 808


>UniRef50_UPI00015B6253 Cluster: PREDICTED: similar to CG33715-PD;
            n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
            CG33715-PD - Nasonia vitripennis
          Length = 7697

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +2

Query: 341  LXEPSVEKSYD---LXINXELDTVKNAXSNNNPXKTERSVIXXIXTISVWLXEIQXK-YX 508
            L   ++EKS++     +  +L  +KNA    N    E + I  + TIS WL  I+ + + 
Sbjct: 5392 LENSALEKSFENKASAVLKDLKALKNAVEEKNIVIIEETFITVVETISTWLETIESRIFL 5451

Query: 509  EKQCXEKNLQKRLEKLRSLHNYIXYLNEII 598
             ++C         +    L   + Y+ E I
Sbjct: 5452 GRECPSGPSSNDTKNFVELKEEVHYVEEKI 5481


>UniRef50_Q22Z50 Cluster: F-actin capping protein alpha subunit
           containing protein; n=1; Tetrahymena thermophila
           SB210|Rep: F-actin capping protein alpha subunit
           containing protein - Tetrahymena thermophila SB210
          Length = 810

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 287 QSVIQSPKNPTDNSMTVALXEPSVEKSYD 373
           Q+++ S  NP DNS+T     P VE+S+D
Sbjct: 278 QTILSSAFNPYDNSVTSTFLPPQVEQSFD 306


>UniRef50_A5DL63 Cluster: Predicted protein; n=1; Pichia
           guilliermondii|Rep: Predicted protein - Pichia
           guilliermondii (Yeast) (Candida guilliermondii)
          Length = 670

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 6   ILQSPGSLSDPINSEL--SLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVV 161
           + + P  ++ PINS +  +   + TS+D ++ D P T   + +  S DLP++ +
Sbjct: 336 VSEVPQRINSPINSNVLDAPQSSSTSNDNNVPDIPQTSNSLKENNSSDLPQKSI 389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,814,352
Number of Sequences: 1657284
Number of extensions: 6283883
Number of successful extensions: 18741
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18715
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)