Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0135.Seq
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p pro... 37 0.019
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 37 0.019
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 37 0.019
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 37 0.019
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 37 0.019
AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p pro... 30 2.2
AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA... 30 2.2
AY060599-1|AAL28147.1| 578|Drosophila melanogaster GH01794p pro... 29 5.1
AE014296-745|AAF47828.1| 578|Drosophila melanogaster CG1135-PA ... 29 5.1
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 29 6.8
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 6.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 6.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 6.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 6.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 6.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 6.8
>BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p
protein.
Length = 824
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 21 GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
G++SDP+N SL TS+ +S +TP+T S IT+P ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 21 GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
G++SDP+N SL TS+ +S +TP+T S IT+P ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 21 GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
G++SDP+N SL TS+ +S +TP+T S IT+P ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 21 GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
G++SDP+N SL TS+ +S +TP+T S IT+P ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 37.1 bits (82), Expect = 0.019
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 21 GSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKL 173
G++SDP+N SL TS+ +S +TP+T S IT+P ++PP +
Sbjct: 315 GNISDPLNLN-SLQNENTSNASSTNNTPATTPRQSPITTPPKVEVIIPPNI 364
>AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p
protein.
Length = 873
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 12 QSPGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKLTYSDVV 191
Q+P + + P + + ++T T+ T+ TP T+E + T P +V P+ T + +
Sbjct: 478 QAPATTTRPTTTVRTTTITTTT--TTATTTPKTEETTTTTTKKPEPTTMVAPRTTKTSAI 535
Query: 192 Q 194
+
Sbjct: 536 E 536
>AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA
protein.
Length = 873
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 12 QSPGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPKLTYSDVV 191
Q+P + + P + + ++T T+ T+ TP T+E + T P +V P+ T + +
Sbjct: 478 QAPATTTRPTTTVRTTTITTTT--TTATTTPKTEETTTTTTKKPEPTTMVAPRTTKTSAI 535
Query: 192 Q 194
+
Sbjct: 536 E 536
>AY060599-1|AAL28147.1| 578|Drosophila melanogaster GH01794p
protein.
Length = 578
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPP 167
P + P+N S TP S D+ L TPST +S + +P P + P
Sbjct: 142 PHTTLAPLNIPTSTPQTPLSVDSLLPGTPSTVASLS-LATPTTPAPLATP 190
>AE014296-745|AAF47828.1| 578|Drosophila melanogaster CG1135-PA
protein.
Length = 578
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITSPDLPRQVVPP 167
P + P+N S TP S D+ L TPST +S + +P P + P
Sbjct: 142 PHTTLAPLNIPTSTPQTPLSVDSLLPGTPSTVASLS-LATPTTPAPLATP 190
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p protein.
Length = 1521
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1293 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1332
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1771 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1810
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1777 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1816
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1720 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1759
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1720 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1759
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1777 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1816
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 18 PGSLSDPINSELSLSVTPTSDDTSLRDTPSTDEGISQITS 137
PGS + S LSL T S +TS + ST G S +TS
Sbjct: 1777 PGSTNVGAPSSLSLDSTTASVETSASISSSTSNGNSSLTS 1816
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,969,717
Number of Sequences: 53049
Number of extensions: 297572
Number of successful extensions: 847
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -