Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0134.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.50 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.50 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 78  VYTCNVNYPCFCF 40
           +YT N+ Y CFCF
Sbjct: 316 IYTFNLFYLCFCF 328


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 78  VYTCNVNYPCFCF 40
           +YT N+ Y CFCF
Sbjct: 272 IYTFNLFYLCFCF 284


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 147 KFSTMSFNFSLCFY 106
           +F+T+ F+F  C+Y
Sbjct: 264 QFNTIVFSFCYCYY 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,937
Number of Sequences: 336
Number of extensions: 1231
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)