Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0132.Seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.8  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   9.0  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   9.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +2

Query: 362  FGHLVH-ALGRAAGGAKLPSAGLCLNASKA 448
            +  L+H A+G   GG  L   G CL   +A
Sbjct: 936  YSFLMHTAVGHGGGGQSLSGPGSCLEDFRA 965


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
          inhibitor protein protein.
          Length = 335

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 52 THRDCESTAYRSFSIK 99
          THRDC S +  SFS K
Sbjct: 37 THRDCCSGSCLSFSYK 52


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +1

Query: 334 YCSVREEPQFRTFGSCTRPSGR-----WCEATIRGIM 429
           YC   ++ +F  F S T P G+     W + + R I+
Sbjct: 395 YCGEEKDKEFLRFISSTAPDGKAKYQEWVQDSCRNIV 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,898
Number of Sequences: 2352
Number of extensions: 10242
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)