Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0130.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p pro...    29   3.6  
BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p pro...    29   3.6  
BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p pro...    29   3.6  
BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p pro...    29   3.6  
BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p pro...    29   3.6  
AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA...    29   3.6  
AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB...    29   3.6  

>BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p
           protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 89  TIVREFTDNELITTLTIGNVKCVRVYK 115


>BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p
           protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 89  TIVREFTDNELITTLTIGNVKCVRVYK 115


>BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p
           protein.
          Length = 142

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 114 TIVREFTDNELITTLTIGNVKCVRVYK 140


>BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p
           protein.
          Length = 130

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128


>BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p
           protein.
          Length = 130

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128


>AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA,
           isoform A protein.
          Length = 117

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 89  TIVREFTDNELITTLTIGNVKCVRVYK 115


>AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB,
           isoform B protein.
          Length = 130

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 461 TYVREFGPEEMKAVMTAKDVTCTRVYK 381
           T VREF   E+   +T  +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,540,649
Number of Sequences: 53049
Number of extensions: 457384
Number of successful extensions: 904
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)