Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0129.Seq
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457175-1|CAG33456.1|  505|Homo sapiens HSPC117 protein.              29   6.3  
CR456450-1|CAG30336.1|  505|Homo sapiens dJ149A16.6 protein.           29   6.3  
BC016707-1|AAH16707.1|  505|Homo sapiens chromosome 22 open read...    29   6.3  
BC010308-1|AAH10308.1|  505|Homo sapiens chromosome 22 open read...    29   6.3  
BC002970-1|AAH02970.1|  505|Homo sapiens chromosome 22 open read...    29   6.3  
AL050255-1|CAB43357.1|  505|Homo sapiens hypothetical protein pr...    29   6.3  
AL021937-9|CAB38260.1|  505|Homo sapiens chromosome 22 open read...    29   6.3  
AF155658-1|AAF67477.1|  505|Homo sapiens putative 55 kDa protein...    29   6.3  

>CR457175-1|CAG33456.1|  505|Homo sapiens HSPC117 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>CR456450-1|CAG30336.1|  505|Homo sapiens dJ149A16.6 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>BC016707-1|AAH16707.1|  505|Homo sapiens chromosome 22 open reading
           frame 28 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>BC010308-1|AAH10308.1|  505|Homo sapiens chromosome 22 open reading
           frame 28 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>BC002970-1|AAH02970.1|  505|Homo sapiens chromosome 22 open reading
           frame 28 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>AL050255-1|CAB43357.1|  505|Homo sapiens hypothetical protein
           protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>AL021937-9|CAB38260.1|  505|Homo sapiens chromosome 22 open reading
           frame 28 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


>AF155658-1|AAF67477.1|  505|Homo sapiens putative 55 kDa protein
           protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 259 GKYAFASKTYSIFLTISVRISVFNTTKHDLE 167
           G YA+ +++   FLT      VFNTT  DL+
Sbjct: 314 GNYAWVNRSSMTFLTRQAFAKVFNTTPDDLD 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,976,043
Number of Sequences: 237096
Number of extensions: 1033658
Number of successful extensions: 1893
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)